Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18■□□□□ 0.47
TRIML2Q8N7C3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
TRIML2Q8N7C3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIML2Q8N7C3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRIML2Q8N7C3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIML2Q8N7C3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRIML2Q8N7C3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18■□□□□ 0.47
TRIML2Q8N7C3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIML2Q8N7C3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIML2Q8N7C3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18■□□□□ 0.47
TRIML2Q8N7C3 AC092666.2-201ENST00000613287 246 ntBASIC18■□□□□ 0.47
TRIML2Q8N7C3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIML2Q8N7C3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRIML2Q8N7C3 FER1L4-210ENST00000615531 5998 ntBASIC18■□□□□ 0.47
TRIML2Q8N7C3 AC099398.1-201ENST00000567919 2776 ntBASIC18■□□□□ 0.47
TRIML2Q8N7C3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRIML2Q8N7C3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18■□□□□ 0.47
TRIML2Q8N7C3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRIML2Q8N7C3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18■□□□□ 0.47
TRIML2Q8N7C3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 AL160286.2-201ENST00000567150 934 ntBASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRIML2Q8N7C3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 KRT17P3-201ENST00000420566 1262 ntBASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 C1QL1P1-201ENST00000568105 661 ntBASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIML2Q8N7C3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIML2Q8N7C3 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms