Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
COMMD1Q8N668 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD1Q8N668 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD1Q8N668 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
COMMD1Q8N668 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD1Q8N668 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD1Q8N668 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
COMMD1Q8N668 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 AC116351.2-201ENST00000606540 1585 ntBASIC15.46■□□□□ 0.07
COMMD1Q8N668 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 AC233702.5-201ENST00000584107 538 ntBASIC15.46■□□□□ 0.07
COMMD1Q8N668 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
COMMD1Q8N668 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
COMMD1Q8N668 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
COMMD1Q8N668 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.06
COMMD1Q8N668 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
COMMD1Q8N668 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COMMD1Q8N668 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
COMMD1Q8N668 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.46■□□□□ 0.06
COMMD1Q8N668 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.46■□□□□ 0.06
COMMD1Q8N668 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.46■□□□□ 0.06
COMMD1Q8N668 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 AC008764.6-201ENST00000595909 2069 ntBASIC15.45■□□□□ 0.06
COMMD1Q8N668 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 RPS2P55-201ENST00000397318 883 ntBASIC15.45■□□□□ 0.06
COMMD1Q8N668 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 AC107956.1-201ENST00000494359 873 ntBASIC15.45■□□□□ 0.06
COMMD1Q8N668 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 AC124283.5-201ENST00000624661 1809 ntBASIC15.45■□□□□ 0.06
COMMD1Q8N668 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
COMMD1Q8N668 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COMMD1Q8N668 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.44■□□□□ 0.06
COMMD1Q8N668 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD1Q8N668 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD1Q8N668 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD1Q8N668 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD1Q8N668 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD1Q8N668 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.44■□□□□ 0.06
COMMD1Q8N668 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
COMMD1Q8N668 AP006587.1-201ENST00000534129 1502 ntBASIC15.44■□□□□ 0.06
COMMD1Q8N668 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
COMMD1Q8N668 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms