Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 HLA-F-220ENST00000434407 884 ntBASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 AL671277.2-201ENST00000458060 996 ntBASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 AC092597.1-201ENST00000487352 616 ntBASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ARHGEF39Q8N4T4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 AL163051.1-201ENST00000569214 1512 ntBASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 AC112777.1-201ENST00000540175 1423 ntBASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ARHGEF39Q8N4T4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 ARMC10P1-201ENST00000313754 855 ntBASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 FAM86EP-206ENST00000510506 987 ntBASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ARHGEF39Q8N4T4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 MYLKP1-201ENST00000509077 1580 ntBASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 AC087388.1-201ENST00000571370 1112 ntBASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 AL121956.5-201ENST00000625261 221 ntBASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ARHGEF39Q8N4T4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 TNXA-203ENST00000507684 2038 ntBASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.52■□□□□ 0.4
ARHGEF39Q8N4T4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms