Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 AP000593.1-201ENST00000393668 712 ntBASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 STARP1-201ENST00000397973 869 ntBASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 RASA4DP-201ENST00000460726 1199 ntBASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 AC112777.1-201ENST00000540175 1423 ntBASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 LINC01238-205ENST00000567549 1107 ntBASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 MIR3917-201ENST00000580971 93 ntBASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 NTF6B-201ENST00000591913 560 ntBASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 AL590326.2-201ENST00000625139 305 ntBASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 AL157888.1-201ENST00000631930 593 ntBASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
C9orf40Q8IXQ3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 AC034232.1-201ENST00000506026 1064 ntBASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.16■□□□□ 0.34
C9orf40Q8IXQ3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 MYC-208ENST00000641036 567 ntBASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
C9orf40Q8IXQ3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
C9orf40Q8IXQ3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
C9orf40Q8IXQ3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.14■□□□□ 0.34
C9orf40Q8IXQ3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 KRT18P35-201ENST00000510488 1269 ntBASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.14■□□□□ 0.33
C9orf40Q8IXQ3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms