Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 AC024563.2-201ENST00000603282 481 ntBASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 AFG3L1P-217ENST00000557444 2447 ntBASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NPAS3Q8IXF0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 IGHV3-47-201ENST00000425060 335 ntBASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 KRT16P4-201ENST00000453883 522 ntBASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 AC106795.1-205ENST00000512851 1056 ntBASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 SLC25A6P4-201ENST00000586535 553 ntBASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 AL353801.3-201ENST00000609898 542 ntBASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPAS3Q8IXF0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 FP475955.4-201ENST00000623131 1990 ntBASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 AL022342.1-201ENST00000400363 863 ntBASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 RN7SL606P-201ENST00000472779 293 ntBASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPAS3Q8IXF0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 AL121912.1-201ENST00000603683 238 ntBASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 AC124864.1-201ENST00000623408 392 ntBASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 AC068587.9-201ENST00000641814 219 ntBASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPAS3Q8IXF0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms