Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.45■□□□□ 0.54
APLFQ8IW19 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.45■□□□□ 0.54
APLFQ8IW19 NIFKP9-201ENST00000419265 221 ntBASIC18.45■□□□□ 0.54
APLFQ8IW19 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.45■□□□□ 0.54
APLFQ8IW19 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
APLFQ8IW19 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.45■□□□□ 0.54
APLFQ8IW19 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.45■□□□□ 0.54
APLFQ8IW19 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.45■□□□□ 0.54
APLFQ8IW19 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
APLFQ8IW19 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
APLFQ8IW19 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
APLFQ8IW19 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.44■□□□□ 0.54
APLFQ8IW19 KRT8P9-201ENST00000558927 1449 ntBASIC18.44■□□□□ 0.54
APLFQ8IW19 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 MIR1238-201ENST00000408483 83 ntBASIC18.44■□□□□ 0.54
APLFQ8IW19 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.44■□□□□ 0.54
APLFQ8IW19 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.44■□□□□ 0.54
APLFQ8IW19 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.44■□□□□ 0.54
APLFQ8IW19 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.44■□□□□ 0.54
APLFQ8IW19 FITM1-202ENST00000559294 800 ntBASIC18.44■□□□□ 0.54
APLFQ8IW19 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.44■□□□□ 0.54
APLFQ8IW19 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.44■□□□□ 0.54
APLFQ8IW19 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.44■□□□□ 0.54
APLFQ8IW19 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.44■□□□□ 0.54
APLFQ8IW19 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 PTBP1P-201ENST00000554374 1601 ntBASIC18.44■□□□□ 0.54
APLFQ8IW19 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.44■□□□□ 0.54
APLFQ8IW19 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.44■□□□□ 0.54
APLFQ8IW19 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.44■□□□□ 0.54
APLFQ8IW19 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.44■□□□□ 0.54
APLFQ8IW19 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
APLFQ8IW19 LINC01568-207ENST00000641790 1380 ntBASIC18.43■□□□□ 0.54
APLFQ8IW19 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 ARMC10P1-201ENST00000313754 855 ntBASIC18.43■□□□□ 0.54
APLFQ8IW19 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
APLFQ8IW19 AC113347.1-201ENST00000413321 391 ntBASIC18.43■□□□□ 0.54
APLFQ8IW19 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.43■□□□□ 0.54
APLFQ8IW19 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.43■□□□□ 0.54
APLFQ8IW19 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.43■□□□□ 0.54
APLFQ8IW19 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.43■□□□□ 0.54
APLFQ8IW19 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.43■□□□□ 0.54
APLFQ8IW19 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.43■□□□□ 0.54
APLFQ8IW19 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.43■□□□□ 0.54
APLFQ8IW19 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.43■□□□□ 0.54
APLFQ8IW19 NAPSB-206ENST00000562112 1266 ntBASIC18.43■□□□□ 0.54
APLFQ8IW19 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
APLFQ8IW19 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 AL691432.2-201ENST00000607222 2038 ntBASIC18.43■□□□□ 0.54
APLFQ8IW19 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
APLFQ8IW19 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.43■□□□□ 0.54
APLFQ8IW19 KRT18P22-201ENST00000402024 1347 ntBASIC18.43■□□□□ 0.54
APLFQ8IW19 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
APLFQ8IW19 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
APLFQ8IW19 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.42■□□□□ 0.54
APLFQ8IW19 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.42■□□□□ 0.54
APLFQ8IW19 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
APLFQ8IW19 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
APLFQ8IW19 KRT16P1-201ENST00000399124 1418 ntBASIC18.42■□□□□ 0.54
APLFQ8IW19 KRT8P20-201ENST00000423953 1409 ntBASIC18.42■□□□□ 0.54
APLFQ8IW19 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
APLFQ8IW19 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
APLFQ8IW19 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
APLFQ8IW19 AC005521.1-201ENST00000393351 872 ntBASIC18.42■□□□□ 0.54
APLFQ8IW19 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.42■□□□□ 0.54
APLFQ8IW19 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.42■□□□□ 0.54
APLFQ8IW19 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.42■□□□□ 0.54
APLFQ8IW19 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.42■□□□□ 0.54
APLFQ8IW19 CR392000.1-201ENST00000624770 1228 ntBASIC18.42■□□□□ 0.54
APLFQ8IW19 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
APLFQ8IW19 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
APLFQ8IW19 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms