Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC50Q8IVM0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 POU5F1P3-201ENST00000428824 1078 ntBASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 AC004980.1-204ENST00000429707 299 ntBASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC50Q8IVM0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 AC128676.1-201ENST00000454392 318 ntBASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 RPS2P4-201ENST00000476944 856 ntBASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 CD99P1-205ENST00000527459 561 ntBASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC50Q8IVM0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
CCDC50Q8IVM0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 MIR4651-201ENST00000582622 73 ntBASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC50Q8IVM0 AL133373.2-201ENST00000623187 2828 ntBASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 NOC2LP2-201ENST00000407594 1944 ntBASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 PRSS44-201ENST00000515154 1146 ntBASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC50Q8IVM0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms