Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.49■□□□□ 0.07
ZNF546Q86UE3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 AC022211.2-201ENST00000585075 2527 ntBASIC15.48■□□□□ 0.07
ZNF546Q86UE3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.48■□□□□ 0.07
ZNF546Q86UE3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.48■□□□□ 0.07
ZNF546Q86UE3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 KRT18P14-201ENST00000534205 1250 ntBASIC15.47■□□□□ 0.07
ZNF546Q86UE3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 UBE2DNL-204ENST00000602536 740 ntBASIC15.47■□□□□ 0.07
ZNF546Q86UE3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 MYCNOS-205ENST00000641950 531 ntBASIC15.47■□□□□ 0.07
ZNF546Q86UE3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.47■□□□□ 0.07
ZNF546Q86UE3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.47■□□□□ 0.07
ZNF546Q86UE3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ZNF546Q86UE3 AC116351.2-201ENST00000606540 1585 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms