Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTL4Q6ZR62 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.45■□□□□ 0.38
RTL4Q6ZR62 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTL4Q6ZR62 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RTL4Q6ZR62 AC073508.3-201ENST00000619697 1419 ntBASIC17.45■□□□□ 0.38
RTL4Q6ZR62 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTL4Q6ZR62 NEFHP1-201ENST00000412845 2629 ntBASIC17.45■□□□□ 0.38
RTL4Q6ZR62 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.45■□□□□ 0.38
RTL4Q6ZR62 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTL4Q6ZR62 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTL4Q6ZR62 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTL4Q6ZR62 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.45■□□□□ 0.38
RTL4Q6ZR62 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RTL4Q6ZR62 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.44■□□□□ 0.38
RTL4Q6ZR62 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 MIR1224-201ENST00000408193 85 ntBASIC17.44■□□□□ 0.38
RTL4Q6ZR62 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 CROCCP3-202ENST00000420820 1947 ntBASIC17.44■□□□□ 0.38
RTL4Q6ZR62 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RTL4Q6ZR62 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.44■□□□□ 0.38
RTL4Q6ZR62 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 AP003041.3-201ENST00000527151 707 ntBASIC17.43■□□□□ 0.38
RTL4Q6ZR62 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 AL049812.1-201ENST00000432563 2267 ntBASIC17.43■□□□□ 0.38
RTL4Q6ZR62 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 AC006333.2-201ENST00000607957 2099 ntBASIC17.43■□□□□ 0.38
RTL4Q6ZR62 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.43■□□□□ 0.38
RTL4Q6ZR62 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTL4Q6ZR62 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms