Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 CRYGFP-201ENST00000418459 633 ntBASIC21.01■□□□□ 0.95
SHC4Q6S5L8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.01■□□□□ 0.95
SHC4Q6S5L8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
SHC4Q6S5L8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SHC4Q6S5L8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHC4Q6S5L8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SHC4Q6S5L8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21■□□□□ 0.95
SHC4Q6S5L8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHC4Q6S5L8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SHC4Q6S5L8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SHC4Q6S5L8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHC4Q6S5L8 CA15P1-201ENST00000481698 905 ntBASIC21■□□□□ 0.95
SHC4Q6S5L8 AP001412.1-201ENST00000608405 714 ntBASIC21■□□□□ 0.95
SHC4Q6S5L8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21■□□□□ 0.95
SHC4Q6S5L8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHC4Q6S5L8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21■□□□□ 0.95
SHC4Q6S5L8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SHC4Q6S5L8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SHC4Q6S5L8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21■□□□□ 0.95
SHC4Q6S5L8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21■□□□□ 0.95
SHC4Q6S5L8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SHC4Q6S5L8 LETM1P2-201ENST00000597330 2178 ntBASIC21■□□□□ 0.95
SHC4Q6S5L8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21■□□□□ 0.95
SHC4Q6S5L8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SHC4Q6S5L8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21■□□□□ 0.95
SHC4Q6S5L8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 KRT8P50-201ENST00000562022 1438 ntBASIC20.99■□□□□ 0.95
SHC4Q6S5L8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 AL355355.2-201ENST00000442321 338 ntBASIC20.99■□□□□ 0.95
SHC4Q6S5L8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
SHC4Q6S5L8 AC067852.2-201ENST00000590513 2313 ntBASIC20.99■□□□□ 0.95
SHC4Q6S5L8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 AC099343.3-201ENST00000605834 2503 ntBASIC20.98■□□□□ 0.95
SHC4Q6S5L8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 AP003071.4-201ENST00000562276 1284 ntBASIC20.98■□□□□ 0.95
SHC4Q6S5L8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SHC4Q6S5L8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SHC4Q6S5L8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms