Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
C11orf88Q6PI97 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
C11orf88Q6PI97 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
C11orf88Q6PI97 AC093525.10-201ENST00000625130 1569 ntBASIC16.21■□□□□ 0.18
C11orf88Q6PI97 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
C11orf88Q6PI97 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
C11orf88Q6PI97 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
C11orf88Q6PI97 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.21■□□□□ 0.18
C11orf88Q6PI97 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 GCSHP5-201ENST00000443090 522 ntBASIC16.2■□□□□ 0.18
C11orf88Q6PI97 AC128676.1-201ENST00000454392 318 ntBASIC16.2■□□□□ 0.18
C11orf88Q6PI97 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 FP475955.4-201ENST00000623131 1990 ntBASIC16.2■□□□□ 0.18
C11orf88Q6PI97 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
C11orf88Q6PI97 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 PTBP1P-201ENST00000554374 1601 ntBASIC16.19■□□□□ 0.18
C11orf88Q6PI97 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 TEX21P-204ENST00000641479 1693 ntBASIC16.19■□□□□ 0.18
C11orf88Q6PI97 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C11orf88Q6PI97 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms