Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 AC096582.2-201ENST00000510860 516 ntBASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD4Q5XG99 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 TREX1-205ENST00000625293 1783 ntBASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 SLC25A1P1-201ENST00000528351 927 ntBASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 MIR5100-201ENST00000579544 119 ntBASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 BNIP3P18-201ENST00000593976 575 ntBASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LYSMD4Q5XG99 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 KRT18P58-201ENST00000527480 1120 ntBASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 AC114341.1-201ENST00000618070 349 ntBASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 AC068587.9-201ENST00000641814 219 ntBASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
LYSMD4Q5XG99 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 Z98044.1-201ENST00000632503 1764 ntBASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 FP475955.4-201ENST00000623131 1990 ntBASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LYSMD4Q5XG99 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LYSMD4Q5XG99 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms