Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 AC104390.1-201ENST00000555663 520 ntBASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 RNF126P1-202ENST00000569893 925 ntBASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 AC005332.7-201ENST00000614046 2005 ntBASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 AL161938.1-201ENST00000569833 2180 ntBASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 AC116562.4-201ENST00000641316 2276 ntBASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
ARFGEF3Q5TH69 AC006333.2-201ENST00000607957 2099 ntBASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 Z98044.1-201ENST00000632503 1764 ntBASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 ATP5G2P1-201ENST00000433580 426 ntBASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 AC010240.3-201ENST00000607688 395 ntBASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 AL121672.3-201ENST00000608644 468 ntBASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 AC079602.3-201ENST00000623931 403 ntBASIC15.79■□□□□ 0.12
ARFGEF3Q5TH69 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 MIR662-201ENST00000384847 95 ntBASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 AC012615.1-201ENST00000565797 1299 ntBASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 CLEC4GP1-201ENST00000596555 870 ntBASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 AL162741.1-201ENST00000565563 1558 ntBASIC15.78■□□□□ 0.12
ARFGEF3Q5TH69 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms