Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX4Q33E94 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX4Q33E94 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX4Q33E94 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.33■□□□□ 0.36
RFX4Q33E94 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX4Q33E94 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RFX4Q33E94 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RFX4Q33E94 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RFX4Q33E94 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX4Q33E94 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX4Q33E94 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RFX4Q33E94 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFX4Q33E94 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RFX4Q33E94 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.33■□□□□ 0.36
RFX4Q33E94 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RFX4Q33E94 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RFX4Q33E94 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFX4Q33E94 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
RFX4Q33E94 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.32■□□□□ 0.36
RFX4Q33E94 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RFX4Q33E94 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
RFX4Q33E94 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.32■□□□□ 0.36
RFX4Q33E94 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
RFX4Q33E94 AC008687.6-201ENST00000596318 630 ntBASIC17.32■□□□□ 0.36
RFX4Q33E94 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.32■□□□□ 0.36
RFX4Q33E94 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RFX4Q33E94 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
RFX4Q33E94 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.32■□□□□ 0.36
RFX4Q33E94 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RFX4Q33E94 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
RFX4Q33E94 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFX4Q33E94 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RFX4Q33E94 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 AC135776.1-201ENST00000319817 2481 ntBASIC17.31■□□□□ 0.36
RFX4Q33E94 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.31■□□□□ 0.36
RFX4Q33E94 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 AC138028.4-201ENST00000564984 1845 ntBASIC17.31■□□□□ 0.36
RFX4Q33E94 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.31■□□□□ 0.36
RFX4Q33E94 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.31■□□□□ 0.36
RFX4Q33E94 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.31■□□□□ 0.36
RFX4Q33E94 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.31■□□□□ 0.36
RFX4Q33E94 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.31■□□□□ 0.36
RFX4Q33E94 SOX15-203ENST00000570788 1093 ntBASIC17.31■□□□□ 0.36
RFX4Q33E94 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.31■□□□□ 0.36
RFX4Q33E94 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RFX4Q33E94 AC083880.1-201ENST00000608266 535 ntBASIC17.31■□□□□ 0.36
RFX4Q33E94 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RFX4Q33E94 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.31■□□□□ 0.36
RFX4Q33E94 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.31■□□□□ 0.36
RFX4Q33E94 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFX4Q33E94 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.3■□□□□ 0.36
RFX4Q33E94 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX4Q33E94 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.3■□□□□ 0.36
RFX4Q33E94 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.3■□□□□ 0.36
RFX4Q33E94 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.3■□□□□ 0.36
RFX4Q33E94 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.3■□□□□ 0.36
RFX4Q33E94 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RFX4Q33E94 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms