Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RSPO4Q2I0M5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RSPO4Q2I0M5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18■□□□□ 0.47
RSPO4Q2I0M5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RSPO4Q2I0M5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 AC012640.2-201ENST00000561606 901 ntBASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.99■□□□□ 0.47
RSPO4Q2I0M5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 RCN1P2-201ENST00000398357 915 ntBASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RSPO4Q2I0M5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 OR7E14P-202ENST00000530490 1290 ntBASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 SPCS2P1-201ENST00000561636 679 ntBASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 AC007225.1-201ENST00000566331 1836 ntBASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 LINC01006-201ENST00000333319 2292 ntBASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.97■□□□□ 0.47
RSPO4Q2I0M5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 AC006128.1-201ENST00000624704 1661 ntBASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RSPO4Q2I0M5 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms