Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.261e-7■□□□□ 11.1
SRSF1Q07955 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.531e-7■□□□□ 11.1
SRSF1Q07955 KDM6B-204ENST00000571047 362 ntTSL 510.39□□□□□ -0.751e-7■□□□□ 11.1
SRSF1Q07955 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.533e-7■□□□□ 11.1
SRSF1Q07955 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC7.98□□□□□ -1.133e-7■□□□□ 11.1
SRSF1Q07955 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.421e-6■□□□□ 11.1
SRSF1Q07955 UBXN4-204ENST00000426921 568 ntTSL 420.08■□□□□ 0.819e-7■□□□□ 11.1
SRSF1Q07955 UBXN4-202ENST00000415164 548 ntTSL 419.12■□□□□ 0.659e-7■□□□□ 11.1
SRSF1Q07955 UBXN4-203ENST00000416538 1255 ntTSL 514.52□□□□□ -0.099e-7■□□□□ 11.1
SRSF1Q07955 UBXN4-201ENST00000272638 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.865e-7■□□□□ 11.1
SRSF1Q07955 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.077e-7■□□□□ 11.1
SRSF1Q07955 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.077e-7■□□□□ 11.1
SRSF1Q07955 DDAH2-220ENST00000488119 1121 ntTSL 220.56■□□□□ 0.887e-7■□□□□ 11.1
SRSF1Q07955 DDAH2-214ENST00000416410 887 ntTSL 220.23■□□□□ 0.837e-7■□□□□ 11.1
SRSF1Q07955 DDAH2-215ENST00000436437 882 ntTSL 319.09■□□□□ 0.657e-7■□□□□ 11.1
SRSF1Q07955 DDAH2-217ENST00000469963 1682 ntTSL 517.86■□□□□ 0.457e-7■□□□□ 11.1
SRSF1Q07955 DDAH2-218ENST00000480913 937 ntTSL 517.81■□□□□ 0.447e-7■□□□□ 11.1
SRSF1Q07955 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.397e-7■□□□□ 11.1
SRSF1Q07955 DDAH2-219ENST00000483792 898 ntTSL 512.08□□□□□ -0.487e-7■□□□□ 11.1
SRSF1Q07955 DDAH2-216ENST00000437288 724 ntTSL 511.63□□□□□ -0.557e-7■□□□□ 11.1
SRSF1Q07955 YARS-206ENST00000478828 1044 ntTSL 211.47□□□□□ -0.571e-8■□□□□ 11.1
SRSF1Q07955 YARS-209ENST00000490826 2178 ntTSL 210.59□□□□□ -0.711e-8■□□□□ 11.1
SRSF1Q07955 YARS-203ENST00000469100 2247 ntTSL 210.16□□□□□ -0.781e-8■□□□□ 11.1
SRSF1Q07955 YARS-208ENST00000487404 2197 ntTSL 28.82□□□□□ -11e-8■□□□□ 11.1
SRSF1Q07955 ARFGAP2-227ENST00000533243 1558 ntTSL 217.9■□□□□ 0.465e-6■□□□□ 11.1
SRSF1Q07955 ARFGAP2-220ENST00000529455 840 ntTSL 514.43□□□□□ -0.15e-6■□□□□ 11.1
SRSF1Q07955 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.4□□□□□ -0.18e-8■□□□□ 11.1
SRSF1Q07955 LINC00969-244ENST00000602127 749 ntTSL 514.4□□□□□ -0.18e-8■□□□□ 11.1
SRSF1Q07955 LINC00969-313ENST00000628917 490 ntTSL 514.4□□□□□ -0.18e-8■□□□□ 11.1
SRSF1Q07955 LINC00969-201ENST00000414625 729 ntTSL 514.39□□□□□ -0.118e-8■□□□□ 11.1
SRSF1Q07955 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.64□□□□□ -0.235e-6■□□□□ 11.1
SRSF1Q07955 ARFGAP2-226ENST00000532478 940 ntTSL 513.2□□□□□ -0.35e-6■□□□□ 11.1
SRSF1Q07955 LINC00969-217ENST00000451982 1161 ntTSL 513□□□□□ -0.338e-8■□□□□ 11.1
SRSF1Q07955 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC12.4□□□□□ -0.428e-8■□□□□ 11.1
SRSF1Q07955 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.97□□□□□ -0.495e-6■□□□□ 11.1
SRSF1Q07955 ARFGAP2-201ENST00000395449 1772 ntTSL 511.37□□□□□ -0.595e-6■□□□□ 11.1
SRSF1Q07955 LINC00969-296ENST00000627718 510 ntTSL 511.12□□□□□ -0.638e-8■□□□□ 11.1
SRSF1Q07955 LINC00969-320ENST00000629823 869 ntTSL 511.1□□□□□ -0.638e-8■□□□□ 11.1
SRSF1Q07955 ARFGAP2-225ENST00000532438 740 ntTSL 411□□□□□ -0.655e-6■□□□□ 11.1
SRSF1Q07955 ARFGAP2-214ENST00000527927 850 ntTSL 510.77□□□□□ -0.695e-6■□□□□ 11.1
SRSF1Q07955 ARFGAP2-210ENST00000526342 474 ntTSL 59.82□□□□□ -0.845e-6■□□□□ 11.1
SRSF1Q07955 LINC00969-230ENST00000597034 731 ntTSL 59.21□□□□□ -0.948e-8■□□□□ 11.1
SRSF1Q07955 ARFGAP2-205ENST00000524782 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.995e-6■□□□□ 11.1
SRSF1Q07955 LINC00969-290ENST00000627502 874 ntTSL 57.41□□□□□ -1.228e-8■□□□□ 11.1
SRSF1Q07955 LINC00969-324ENST00000630243 955 ntTSL 56.39□□□□□ -1.398e-8■□□□□ 11.1
SRSF1Q07955 MTSS1L-203ENST00000576338 518 ntTSL 316.04■□□□□ 0.162e-11■□□□□ 11.1
SRSF1Q07955 ASXL1-204ENST00000470145 1073 ntTSL 59.32□□□□□ -0.922e-6■□□□□ 11.1
SRSF1Q07955 KIAA0907-205ENST00000466520 549 ntTSL 311.54□□□□□ -0.562e-8■□□□□ 11.1
SRSF1Q07955 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.31□□□□□ -0.442e-7■□□□□ 11.1
SRSF1Q07955 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.652e-7■□□□□ 11.1
SRSF1Q07955 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.712e-7■□□□□ 11.1
SRSF1Q07955 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.752e-7■□□□□ 11.1
SRSF1Q07955 SNX6-210ENST00000557341 559 ntTSL 513.6□□□□□ -0.232e-6■□□□□ 11.1
SRSF1Q07955 SNX6-203ENST00000555416 1215 ntTSL 1 (best)12.79□□□□□ -0.362e-6■□□□□ 11.1
SRSF1Q07955 SNX6-206ENST00000556162 1855 ntTSL 212.63□□□□□ -0.392e-6■□□□□ 11.1
SRSF1Q07955 SNX6-209ENST00000557265 725 ntTSL 312.46□□□□□ -0.412e-6■□□□□ 11.1
SRSF1Q07955 SNX6-207ENST00000556303 539 ntTSL 211.96□□□□□ -0.492e-6■□□□□ 11.1
SRSF1Q07955 SNX6-208ENST00000556712 851 ntTSL 59.68□□□□□ -0.862e-6■□□□□ 11.1
SRSF1Q07955 SNX6-201ENST00000362031 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.92e-6■□□□□ 11.1
SRSF1Q07955 XIST-211ENST00000635841 1734 ntTSL 5 BASIC7.51□□□□□ -1.211e-6■□□□□ 11.1
SRSF1Q07955 CHRD-215ENST00000485883 568 ntTSL 419.99■□□□□ 0.799e-7■□□□□ 11.1
SRSF1Q07955 CHRD-216ENST00000486066 546 ntTSL 419.72■□□□□ 0.759e-7■□□□□ 11.1
SRSF1Q07955 CHRD-213ENST00000482014 560 ntTSL 416.72■□□□□ 0.279e-7■□□□□ 11.1
SRSF1Q07955 CHRD-214ENST00000482805 608 ntTSL 416.5■□□□□ 0.239e-7■□□□□ 11.1
SRSF1Q07955 CHRD-210ENST00000461684 677 ntTSL 415.81■□□□□ 0.129e-7■□□□□ 11.1
SRSF1Q07955 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.95■□□□□ 0.621e-7■□□□□ 11.1
SRSF1Q07955 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.591e-7■□□□□ 11.1
SRSF1Q07955 WDR74-213ENST00000542347 988 ntTSL 216.08■□□□□ 0.161e-7■□□□□ 11.1
SRSF1Q07955 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.011e-7■□□□□ 11.1
SRSF1Q07955 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 01e-7■□□□□ 11.1
SRSF1Q07955 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.07□□□□□ -0.321e-7■□□□□ 11.1
SRSF1Q07955 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC10.97□□□□□ -0.651e-6■□□□□ 11.1
SRSF1Q07955 ACTB-213ENST00000493945 1236 ntTSL 512.97□□□□□ -0.333e-10■□□□□ 11.1
SRSF1Q07955 SREBF1-203ENST00000395751 4653 ntTSL 214.11□□□□□ -0.154e-7■□□□□ 11.1
SRSF1Q07955 SREBF1-204ENST00000395756 3026 ntTSL 213.83□□□□□ -0.21e-8■□□□□ 11.1
SRSF1Q07955 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.664e-7■□□□□ 11.1
SRSF1Q07955 AL109811.4-203ENST00000612542 554 ntAPPRIS P1 TSL 53.6□□□□□ -1.835e-7■□□□□ 11
SRSF1Q07955 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.92□□□□□ -0.181e-323■□□□□ 11
SRSF1Q07955 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.11□□□□□ -1.591e-323■□□□□ 11
SRSF1Q07955 RABL6-210ENST00000484471 2746 ntTSL 515.27■□□□□ 0.043e-7■□□□□ 11
SRSF1Q07955 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.193e-7■□□□□ 11
SRSF1Q07955 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.313e-7■□□□□ 11
SRSF1Q07955 BCL2L1-205ENST00000422920 1157 ntTSL 224.58■■□□□ 1.531e-20■□□□□ 11
SRSF1Q07955 BCL2L1-208ENST00000450273 894 ntTSL 317.53■□□□□ 0.41e-20■□□□□ 11
SRSF1Q07955 BCL2L1-209ENST00000456404 914 ntTSL 217.24■□□□□ 0.351e-20■□□□□ 11
SRSF1Q07955 BCL2L1-207ENST00000439267 781 ntTSL 212.88□□□□□ -0.351e-20■□□□□ 11
SRSF1Q07955 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC10.46□□□□□ -0.741e-20■□□□□ 11
SRSF1Q07955 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.761e-20■□□□□ 11
SRSF1Q07955 BCL2L1-204ENST00000420488 820 ntTSL 210.31□□□□□ -0.761e-20■□□□□ 11
SRSF1Q07955 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.781e-20■□□□□ 11
SRSF1Q07955 CCS-207ENST00000531990 868 ntTSL 218.84■□□□□ 0.612e-7■□□□□ 11
SRSF1Q07955 CCS-204ENST00000526066 872 ntTSL 216.76■□□□□ 0.272e-7■□□□□ 11
SRSF1Q07955 CCS-203ENST00000526058 593 ntTSL 415.99■□□□□ 0.152e-7■□□□□ 11
SRSF1Q07955 TMEM214-202ENST00000321326 2700 ntTSL 215.81■□□□□ 0.127e-9■□□□□ 11
SRSF1Q07955 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.02■□□□□ -07e-9■□□□□ 11
SRSF1Q07955 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.177e-9■□□□□ 11
SRSF1Q07955 TMEM214-206ENST00000435172 1480 ntTSL 513.7□□□□□ -0.227e-9■□□□□ 11
SRSF1Q07955 TMEM214-211ENST00000475258 927 ntTSL 211.39□□□□□ -0.597e-9■□□□□ 11
SRSF1Q07955 AFDN-209ENST00000400825 963 ntTSL 527.84■■■□□ 2.057e-9■□□□□ 11
SRSF1Q07955 AFDN-208ENST00000400824 875 ntTSL 526.36■■□□□ 1.817e-9■□□□□ 11
Retrieved 100 of 14,836 protein–RNA pairs in 23 ms