Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRAMEP78395 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.79■□□□□ 0.6
PRAMEP78395 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PRAMEP78395 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEP78395 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.78■□□□□ 0.6
PRAMEP78395 AC104581.1-202ENST00000635932 2618 ntBASIC18.78■□□□□ 0.6
PRAMEP78395 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEP78395 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PRAMEP78395 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEP78395 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PRAMEP78395 TSPY7P-201ENST00000431358 1114 ntBASIC18.78■□□□□ 0.6
PRAMEP78395 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEP78395 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEP78395 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.78■□□□□ 0.6
PRAMEP78395 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.78■□□□□ 0.6
PRAMEP78395 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEP78395 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
PRAMEP78395 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRAMEP78395 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.78■□□□□ 0.6
PRAMEP78395 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.77■□□□□ 0.6
PRAMEP78395 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.77■□□□□ 0.6
PRAMEP78395 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PRAMEP78395 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.77■□□□□ 0.6
PRAMEP78395 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.77■□□□□ 0.6
PRAMEP78395 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PRAMEP78395 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRAMEP78395 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEP78395 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.77■□□□□ 0.59
PRAMEP78395 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEP78395 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRAMEP78395 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEP78395 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEP78395 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEP78395 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEP78395 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEP78395 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PRAMEP78395 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEP78395 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEP78395 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PRAMEP78395 UNC93B2-201ENST00000285383 730 ntBASIC18.76■□□□□ 0.59
PRAMEP78395 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEP78395 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PRAMEP78395 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEP78395 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEP78395 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEP78395 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEP78395 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEP78395 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEP78395 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRAMEP78395 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEP78395 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEP78395 AC090164.3-201ENST00000610780 2143 ntBASIC18.76■□□□□ 0.59
PRAMEP78395 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.76■□□□□ 0.59
PRAMEP78395 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.76■□□□□ 0.59
PRAMEP78395 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.75■□□□□ 0.59
PRAMEP78395 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PRAMEP78395 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRAMEP78395 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PRAMEP78395 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PRAMEP78395 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.75■□□□□ 0.59
PRAMEP78395 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms