Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.03□□□□□ -0.32
CKS1BP61024 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS1BP61024 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS1BP61024 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.03□□□□□ -0.32
CKS1BP61024 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.03□□□□□ -0.32
CKS1BP61024 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS1BP61024 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CKS1BP61024 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS1BP61024 AC137761.2-201ENST00000561729 223 ntBASIC13.03□□□□□ -0.32
CKS1BP61024 AC145350.3-201ENST00000569033 163 ntBASIC13.03□□□□□ -0.32
CKS1BP61024 AL589743.5-201ENST00000616611 1050 ntBASIC13.03□□□□□ -0.32
CKS1BP61024 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
CKS1BP61024 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.03□□□□□ -0.32
CKS1BP61024 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CKS1BP61024 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 TSPY26P-202ENST00000565928 3884 ntBASIC13.03□□□□□ -0.32
CKS1BP61024 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CKS1BP61024 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.03□□□□□ -0.32
CKS1BP61024 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CKS1BP61024 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CKS1BP61024 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CKS1BP61024 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CKS1BP61024 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CKS1BP61024 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CKS1BP61024 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CKS1BP61024 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.02□□□□□ -0.32
CKS1BP61024 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.02□□□□□ -0.32
CKS1BP61024 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CKS1BP61024 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.02□□□□□ -0.32
CKS1BP61024 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CKS1BP61024 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.02□□□□□ -0.32
CKS1BP61024 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CKS1BP61024 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CKS1BP61024 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CKS1BP61024 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CKS1BP61024 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CKS1BP61024 AC016769.1-201ENST00000409132 1010 ntBASIC13.02□□□□□ -0.33
CKS1BP61024 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
CKS1BP61024 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.02□□□□□ -0.33
CKS1BP61024 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.02□□□□□ -0.33
CKS1BP61024 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 AC023632.3-201ENST00000521633 145 ntBASIC13.02□□□□□ -0.33
CKS1BP61024 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CKS1BP61024 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CKS1BP61024 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CKS1BP61024 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CKS1BP61024 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.02□□□□□ -0.33
CKS1BP61024 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.02□□□□□ -0.33
CKS1BP61024 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CKS1BP61024 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CKS1BP61024 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CKS1BP61024 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.01□□□□□ -0.33
CKS1BP61024 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CKS1BP61024 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.01□□□□□ -0.33
CKS1BP61024 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.01□□□□□ -0.33
CKS1BP61024 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CKS1BP61024 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.01□□□□□ -0.33
CKS1BP61024 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.01□□□□□ -0.33
CKS1BP61024 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CKS1BP61024 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CKS1BP61024 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms