Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERVFC1P60507 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.57■□□□□ 0.72
ERVFC1P60507 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERVFC1P60507 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ERVFC1P60507 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ERVFC1P60507 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ERVFC1P60507 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ERVFC1P60507 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.56■□□□□ 0.72
ERVFC1P60507 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.56■□□□□ 0.72
ERVFC1P60507 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.56■□□□□ 0.72
ERVFC1P60507 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
ERVFC1P60507 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 POM121L3P-201ENST00000419331 1163 ntBASIC19.56■□□□□ 0.72
ERVFC1P60507 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.56■□□□□ 0.72
ERVFC1P60507 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 SLC25A1P1-201ENST00000528351 927 ntBASIC19.56■□□□□ 0.72
ERVFC1P60507 MIR5100-201ENST00000579544 119 ntBASIC19.56■□□□□ 0.72
ERVFC1P60507 BNIP3P18-201ENST00000593976 575 ntBASIC19.56■□□□□ 0.72
ERVFC1P60507 AC148477.8-201ENST00000624298 468 ntBASIC19.56■□□□□ 0.72
ERVFC1P60507 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 Z98044.1-201ENST00000632503 1764 ntBASIC19.56■□□□□ 0.72
ERVFC1P60507 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ERVFC1P60507 KRT8P50-201ENST00000562022 1438 ntBASIC19.56■□□□□ 0.72
ERVFC1P60507 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.56■□□□□ 0.72
ERVFC1P60507 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERVFC1P60507 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERVFC1P60507 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERVFC1P60507 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERVFC1P60507 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.55■□□□□ 0.72
ERVFC1P60507 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.55■□□□□ 0.72
ERVFC1P60507 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.55■□□□□ 0.72
ERVFC1P60507 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERVFC1P60507 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
ERVFC1P60507 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERVFC1P60507 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERVFC1P60507 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERVFC1P60507 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERVFC1P60507 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
ERVFC1P60507 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.55■□□□□ 0.72
ERVFC1P60507 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.55■□□□□ 0.72
ERVFC1P60507 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERVFC1P60507 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.55■□□□□ 0.72
ERVFC1P60507 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.55■□□□□ 0.72
ERVFC1P60507 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.55■□□□□ 0.72
ERVFC1P60507 AL591684.3-201ENST00000605187 298 ntBASIC19.55■□□□□ 0.72
ERVFC1P60507 AL773604.1-201ENST00000617417 272 ntBASIC19.55■□□□□ 0.72
ERVFC1P60507 AC139530.3-201ENST00000620344 690 ntBASIC19.55■□□□□ 0.72
ERVFC1P60507 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.55■□□□□ 0.72
ERVFC1P60507 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
ERVFC1P60507 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERVFC1P60507 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
ERVFC1P60507 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERVFC1P60507 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.55■□□□□ 0.72
ERVFC1P60507 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.55■□□□□ 0.72
ERVFC1P60507 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.55■□□□□ 0.72
ERVFC1P60507 LINC01521-201ENST00000504184 1943 ntBASIC19.55■□□□□ 0.72
ERVFC1P60507 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.54■□□□□ 0.72
ERVFC1P60507 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ERVFC1P60507 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 AL357033.4-201ENST00000617703 1807 ntBASIC19.54■□□□□ 0.72
ERVFC1P60507 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 AL031284.1-201ENST00000419297 478 ntBASIC19.54■□□□□ 0.72
ERVFC1P60507 PMS2P1-201ENST00000431037 1228 ntBASIC19.54■□□□□ 0.72
ERVFC1P60507 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ERVFC1P60507 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.54■□□□□ 0.72
ERVFC1P60507 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.54■□□□□ 0.72
ERVFC1P60507 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.54■□□□□ 0.72
ERVFC1P60507 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERVFC1P60507 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ERVFC1P60507 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.53■□□□□ 0.72
ERVFC1P60507 AC141586.3-201ENST00000562166 1838 ntBASIC19.53■□□□□ 0.72
ERVFC1P60507 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERVFC1P60507 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ERVFC1P60507 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
ERVFC1P60507 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ERVFC1P60507 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERVFC1P60507 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERVFC1P60507 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERVFC1P60507 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms