Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 AP000523.1-201ENST00000398242 1049 ntBASIC21.24■□□□□ 0.99
CHMP4BP1P59074 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 MIR4674-201ENST00000582457 87 ntBASIC21.24■□□□□ 0.99
CHMP4BP1P59074 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP4BP1P59074 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 SDHAP1-207ENST00000440850 2000 ntBASIC21.23■□□□□ 0.99
CHMP4BP1P59074 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 HCG4P8-203ENST00000443049 980 ntBASIC21.23■□□□□ 0.99
CHMP4BP1P59074 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 AC008622.2-201ENST00000617006 1229 ntBASIC21.23■□□□□ 0.99
CHMP4BP1P59074 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 ZNF815P-204ENST00000434898 1737 ntBASIC21.23■□□□□ 0.99
CHMP4BP1P59074 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CHMP4BP1P59074 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 KRT18P48-201ENST00000434763 852 ntBASIC21.22■□□□□ 0.99
CHMP4BP1P59074 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.22■□□□□ 0.99
CHMP4BP1P59074 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHMP4BP1P59074 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 LINC01311-201ENST00000565162 1445 ntBASIC21.21■□□□□ 0.99
CHMP4BP1P59074 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP4BP1P59074 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.2■□□□□ 0.98
CHMP4BP1P59074 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms