Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.5■□□□□ 0.87
PEX3P56589 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PEX3P56589 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PEX3P56589 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 MIR1224-201ENST00000408193 85 ntBASIC20.49■□□□□ 0.87
PEX3P56589 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.49■□□□□ 0.87
PEX3P56589 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.49■□□□□ 0.87
PEX3P56589 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.49■□□□□ 0.87
PEX3P56589 AC022616.7-201ENST00000525383 220 ntBASIC20.49■□□□□ 0.87
PEX3P56589 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.49■□□□□ 0.87
PEX3P56589 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.49■□□□□ 0.87
PEX3P56589 AC004408.2-201ENST00000623613 2777 ntBASIC20.49■□□□□ 0.87
PEX3P56589 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PEX3P56589 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PEX3P56589 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.48■□□□□ 0.87
PEX3P56589 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.48■□□□□ 0.87
PEX3P56589 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.48■□□□□ 0.87
PEX3P56589 KRT8P50-201ENST00000562022 1438 ntBASIC20.48■□□□□ 0.87
PEX3P56589 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.48■□□□□ 0.87
PEX3P56589 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.48■□□□□ 0.87
PEX3P56589 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.48■□□□□ 0.87
PEX3P56589 KRT18P41-201ENST00000518924 1277 ntBASIC20.48■□□□□ 0.87
PEX3P56589 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.48■□□□□ 0.87
PEX3P56589 AC104390.1-201ENST00000555663 520 ntBASIC20.48■□□□□ 0.87
PEX3P56589 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PEX3P56589 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.48■□□□□ 0.87
PEX3P56589 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.48■□□□□ 0.87
PEX3P56589 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.48■□□□□ 0.87
PEX3P56589 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.48■□□□□ 0.87
PEX3P56589 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PEX3P56589 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PEX3P56589 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.48■□□□□ 0.87
PEX3P56589 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.47■□□□□ 0.87
PEX3P56589 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PEX3P56589 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PEX3P56589 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PEX3P56589 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.47■□□□□ 0.87
PEX3P56589 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 AC092647.4-201ENST00000457211 535 ntBASIC20.47■□□□□ 0.87
PEX3P56589 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PEX3P56589 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.47■□□□□ 0.87
PEX3P56589 AC010331.1-201ENST00000611423 582 ntBASIC20.47■□□□□ 0.87
PEX3P56589 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PEX3P56589 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PEX3P56589 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PEX3P56589 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PEX3P56589 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.47■□□□□ 0.87
PEX3P56589 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PEX3P56589 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.47■□□□□ 0.87
PEX3P56589 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
PEX3P56589 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PEX3P56589 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PEX3P56589 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PEX3P56589 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.46■□□□□ 0.87
PEX3P56589 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.46■□□□□ 0.87
PEX3P56589 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
PEX3P56589 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PEX3P56589 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms