Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 ABALON-201ENST00000629058 1903 ntBASIC18.28■□□□□ 0.52
PKNOX1P55347 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKNOX1P55347 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.28■□□□□ 0.52
PKNOX1P55347 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.28■□□□□ 0.52
PKNOX1P55347 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.28■□□□□ 0.52
PKNOX1P55347 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PKNOX1P55347 KRT8P3-201ENST00000519669 1449 ntBASIC18.28■□□□□ 0.52
PKNOX1P55347 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PKNOX1P55347 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKNOX1P55347 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PKNOX1P55347 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PKNOX1P55347 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKNOX1P55347 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PKNOX1P55347 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
PKNOX1P55347 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
PKNOX1P55347 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PKNOX1P55347 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKNOX1P55347 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKNOX1P55347 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKNOX1P55347 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PKNOX1P55347 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKNOX1P55347 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKNOX1P55347 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PKNOX1P55347 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.27■□□□□ 0.52
PKNOX1P55347 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PKNOX1P55347 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKNOX1P55347 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKNOX1P55347 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PKNOX1P55347 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
PKNOX1P55347 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PKNOX1P55347 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.27■□□□□ 0.52
PKNOX1P55347 KSR1P1-201ENST00000446298 240 ntBASIC18.27■□□□□ 0.52
PKNOX1P55347 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.27■□□□□ 0.52
PKNOX1P55347 AP002982.1-201ENST00000492365 877 ntBASIC18.27■□□□□ 0.52
PKNOX1P55347 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
PKNOX1P55347 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.27■□□□□ 0.52
PKNOX1P55347 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.27■□□□□ 0.52
PKNOX1P55347 MTMR9LP-203ENST00000426597 1545 ntBASIC18.27■□□□□ 0.51
PKNOX1P55347 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PKNOX1P55347 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PKNOX1P55347 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.27■□□□□ 0.51
PKNOX1P55347 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PKNOX1P55347 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PKNOX1P55347 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PKNOX1P55347 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
PKNOX1P55347 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 KRT8P32-201ENST00000512863 1461 ntBASIC18.26■□□□□ 0.51
PKNOX1P55347 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.26■□□□□ 0.51
PKNOX1P55347 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PKNOX1P55347 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.26■□□□□ 0.51
PKNOX1P55347 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 AC012313.1-201ENST00000593393 3059 ntBASIC18.26■□□□□ 0.51
PKNOX1P55347 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.26■□□□□ 0.51
PKNOX1P55347 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.26■□□□□ 0.51
PKNOX1P55347 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.26■□□□□ 0.51
PKNOX1P55347 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.26■□□□□ 0.51
PKNOX1P55347 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PKNOX1P55347 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.26■□□□□ 0.51
PKNOX1P55347 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 AC073648.6-201ENST00000641589 218 ntBASIC18.26■□□□□ 0.51
PKNOX1P55347 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.26■□□□□ 0.51
PKNOX1P55347 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
PKNOX1P55347 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKNOX1P55347 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
PKNOX1P55347 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.25■□□□□ 0.51
PKNOX1P55347 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.25■□□□□ 0.51
PKNOX1P55347 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.25■□□□□ 0.51
PKNOX1P55347 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
PKNOX1P55347 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
PKNOX1P55347 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
PKNOX1P55347 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.25■□□□□ 0.51
PKNOX1P55347 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKNOX1P55347 AL353807.1-201ENST00000427475 662 ntBASIC18.25■□□□□ 0.51
PKNOX1P55347 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.25■□□□□ 0.51
PKNOX1P55347 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PKNOX1P55347 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms