Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.38■□□□□ 0.69
CDH6P55285 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 AL355075.4-201ENST00000554988 638 ntBASIC19.38■□□□□ 0.69
CDH6P55285 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH6P55285 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH6P55285 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH6P55285 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH6P55285 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH6P55285 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH6P55285 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CDH6P55285 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDH6P55285 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH6P55285 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDH6P55285 KRT8P45-201ENST00000414328 1447 ntBASIC19.37■□□□□ 0.69
CDH6P55285 AC112777.1-201ENST00000540175 1423 ntBASIC19.37■□□□□ 0.69
CDH6P55285 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CDH6P55285 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.37■□□□□ 0.69
CDH6P55285 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 MYC-208ENST00000641036 567 ntBASIC19.37■□□□□ 0.69
CDH6P55285 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH6P55285 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH6P55285 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CDH6P55285 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDH6P55285 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH6P55285 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDH6P55285 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CDH6P55285 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CDH6P55285 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH6P55285 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH6P55285 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 MIR1238-201ENST00000408483 83 ntBASIC19.36■□□□□ 0.69
CDH6P55285 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.36■□□□□ 0.69
CDH6P55285 FITM1-202ENST00000559294 800 ntBASIC19.36■□□□□ 0.69
CDH6P55285 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDH6P55285 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH6P55285 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH6P55285 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH6P55285 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH6P55285 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.36■□□□□ 0.69
CDH6P55285 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH6P55285 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH6P55285 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH6P55285 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.35■□□□□ 0.69
CDH6P55285 AL596275.1-201ENST00000423464 877 ntBASIC19.35■□□□□ 0.69
CDH6P55285 MIR4674-201ENST00000582457 87 ntBASIC19.35■□□□□ 0.69
CDH6P55285 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH6P55285 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.35■□□□□ 0.69
CDH6P55285 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH6P55285 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.35■□□□□ 0.69
CDH6P55285 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDH6P55285 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH6P55285 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH6P55285 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDH6P55285 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDH6P55285 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms