Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PMS1P54277 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.5■□□□□ 0.87
PMS1P54277 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.49■□□□□ 0.87
PMS1P54277 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 AC026471.1-201ENST00000564629 3026 ntBASIC20.49■□□□□ 0.87
PMS1P54277 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PMS1P54277 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.49■□□□□ 0.87
PMS1P54277 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
PMS1P54277 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PMS1P54277 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PMS1P54277 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PMS1P54277 MIR564-202ENST00000385049 94 ntBASIC20.49■□□□□ 0.87
PMS1P54277 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PMS1P54277 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.49■□□□□ 0.87
PMS1P54277 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.49■□□□□ 0.87
PMS1P54277 AC008550.1-201ENST00000511500 884 ntBASIC20.49■□□□□ 0.87
PMS1P54277 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.49■□□□□ 0.87
PMS1P54277 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.49■□□□□ 0.87
PMS1P54277 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.49■□□□□ 0.87
PMS1P54277 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.49■□□□□ 0.87
PMS1P54277 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.49■□□□□ 0.87
PMS1P54277 AP001412.1-201ENST00000608405 714 ntBASIC20.49■□□□□ 0.87
PMS1P54277 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.49■□□□□ 0.87
PMS1P54277 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
PMS1P54277 AC068880.1-201ENST00000507289 2297 ntBASIC20.48■□□□□ 0.87
PMS1P54277 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PMS1P54277 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.48■□□□□ 0.87
PMS1P54277 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PMS1P54277 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.48■□□□□ 0.87
PMS1P54277 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS1P54277 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS1P54277 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.48■□□□□ 0.87
PMS1P54277 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS1P54277 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.48■□□□□ 0.87
PMS1P54277 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PMS1P54277 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS1P54277 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.48■□□□□ 0.87
PMS1P54277 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PMS1P54277 KRT18P41-201ENST00000518924 1277 ntBASIC20.48■□□□□ 0.87
PMS1P54277 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.48■□□□□ 0.87
PMS1P54277 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.48■□□□□ 0.87
PMS1P54277 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.48■□□□□ 0.87
PMS1P54277 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.48■□□□□ 0.87
PMS1P54277 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.48■□□□□ 0.87
PMS1P54277 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PMS1P54277 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS1P54277 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PMS1P54277 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PMS1P54277 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS1P54277 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PMS1P54277 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.48■□□□□ 0.87
PMS1P54277 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS1P54277 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PMS1P54277 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 AL162741.1-201ENST00000565563 1558 ntBASIC20.47■□□□□ 0.87
PMS1P54277 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.47■□□□□ 0.87
PMS1P54277 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PMS1P54277 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.47■□□□□ 0.87
PMS1P54277 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PMS1P54277 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 MCCD1P1-208ENST00000445732 328 ntBASIC20.47■□□□□ 0.87
PMS1P54277 RBM17P1-201ENST00000453646 1190 ntBASIC20.47■□□□□ 0.87
PMS1P54277 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.47■□□□□ 0.87
PMS1P54277 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.47■□□□□ 0.87
PMS1P54277 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.47■□□□□ 0.87
PMS1P54277 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.47■□□□□ 0.87
PMS1P54277 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.47■□□□□ 0.87
PMS1P54277 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.47■□□□□ 0.87
PMS1P54277 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 AC093677.2-201ENST00000600169 1863 ntBASIC20.47■□□□□ 0.87
PMS1P54277 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.47■□□□□ 0.87
PMS1P54277 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.47■□□□□ 0.87
PMS1P54277 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PMS1P54277 NOC2LP2-201ENST00000407594 1944 ntBASIC20.47■□□□□ 0.87
PMS1P54277 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PMS1P54277 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PMS1P54277 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms