Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.48■□□□□ 0.87
ATN1P54259 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.48■□□□□ 0.87
ATN1P54259 HNRNPDP1-201ENST00000439535 754 ntBASIC20.48■□□□□ 0.87
ATN1P54259 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.48■□□□□ 0.87
ATN1P54259 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.48■□□□□ 0.87
ATN1P54259 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.48■□□□□ 0.87
ATN1P54259 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.48■□□□□ 0.87
ATN1P54259 AC116407.3-201ENST00000623905 1129 ntBASIC20.48■□□□□ 0.87
ATN1P54259 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATN1P54259 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATN1P54259 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.48■□□□□ 0.87
ATN1P54259 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.48■□□□□ 0.87
ATN1P54259 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATN1P54259 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATN1P54259 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
ATN1P54259 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ATN1P54259 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.47■□□□□ 0.87
ATN1P54259 MIR3180-4-201ENST00000582223 153 ntBASIC20.47■□□□□ 0.87
ATN1P54259 AC114341.1-201ENST00000618070 349 ntBASIC20.47■□□□□ 0.87
ATN1P54259 AP003400.6-201ENST00000624698 740 ntBASIC20.47■□□□□ 0.87
ATN1P54259 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.47■□□□□ 0.87
ATN1P54259 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATN1P54259 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.47■□□□□ 0.87
ATN1P54259 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.47■□□□□ 0.87
ATN1P54259 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ATN1P54259 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ATN1P54259 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.46■□□□□ 0.87
ATN1P54259 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.46■□□□□ 0.87
ATN1P54259 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
ATN1P54259 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.46■□□□□ 0.87
ATN1P54259 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.46■□□□□ 0.87
ATN1P54259 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC20.46■□□□□ 0.87
ATN1P54259 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.46■□□□□ 0.87
ATN1P54259 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.46■□□□□ 0.87
ATN1P54259 LINC02084-201ENST00000606069 1096 ntBASIC20.46■□□□□ 0.87
ATN1P54259 AL355385.1-201ENST00000606123 409 ntBASIC20.46■□□□□ 0.87
ATN1P54259 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ATN1P54259 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.46■□□□□ 0.87
ATN1P54259 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ATN1P54259 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
ATN1P54259 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATN1P54259 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
ATN1P54259 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ATN1P54259 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.45■□□□□ 0.86
ATN1P54259 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATN1P54259 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.45■□□□□ 0.86
ATN1P54259 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATN1P54259 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATN1P54259 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATN1P54259 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATN1P54259 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
ATN1P54259 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATN1P54259 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATN1P54259 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATN1P54259 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.45■□□□□ 0.86
ATN1P54259 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.45■□□□□ 0.86
ATN1P54259 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATN1P54259 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATN1P54259 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.44■□□□□ 0.86
ATN1P54259 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.44■□□□□ 0.86
ATN1P54259 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.44■□□□□ 0.86
ATN1P54259 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.44■□□□□ 0.86
ATN1P54259 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.44■□□□□ 0.86
ATN1P54259 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ATN1P54259 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATN1P54259 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ATN1P54259 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
ATN1P54259 RPS8P6-201ENST00000426177 609 ntBASIC20.44■□□□□ 0.86
ATN1P54259 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.44■□□□□ 0.86
ATN1P54259 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.44■□□□□ 0.86
ATN1P54259 PGAM5P1-201ENST00000518923 814 ntBASIC20.44■□□□□ 0.86
ATN1P54259 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATN1P54259 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
ATN1P54259 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ATN1P54259 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATN1P54259 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ATN1P54259 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms