Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RPS2P1-201ENST00000434010 821 ntBASIC18.51■□□□□ 0.55
NUBP1P53384 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NUBP1P53384 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.51■□□□□ 0.55
NUBP1P53384 USP9YP2-201ENST00000504503 1000 ntBASIC18.51■□□□□ 0.55
NUBP1P53384 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.51■□□□□ 0.55
NUBP1P53384 USP9YP1-201ENST00000513521 1002 ntBASIC18.51■□□□□ 0.55
NUBP1P53384 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.51■□□□□ 0.55
NUBP1P53384 AC087272.1-201ENST00000523624 533 ntBASIC18.51■□□□□ 0.55
NUBP1P53384 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NUBP1P53384 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
NUBP1P53384 AC005829.1-201ENST00000570002 483 ntBASIC18.51■□□□□ 0.55
NUBP1P53384 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.51■□□□□ 0.55
NUBP1P53384 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.51■□□□□ 0.55
NUBP1P53384 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
NUBP1P53384 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.51■□□□□ 0.55
NUBP1P53384 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUBP1P53384 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUBP1P53384 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NUBP1P53384 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUBP1P53384 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUBP1P53384 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
NUBP1P53384 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NUBP1P53384 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUBP1P53384 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUBP1P53384 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUBP1P53384 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.5■□□□□ 0.55
NUBP1P53384 AP005117.1-201ENST00000584346 1413 ntBASIC18.5■□□□□ 0.55
NUBP1P53384 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NUBP1P53384 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NUBP1P53384 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
NUBP1P53384 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.5■□□□□ 0.55
NUBP1P53384 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.5■□□□□ 0.55
NUBP1P53384 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.5■□□□□ 0.55
NUBP1P53384 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.5■□□□□ 0.55
NUBP1P53384 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.5■□□□□ 0.55
NUBP1P53384 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC18.5■□□□□ 0.55
NUBP1P53384 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.5■□□□□ 0.55
NUBP1P53384 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.5■□□□□ 0.55
NUBP1P53384 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
NUBP1P53384 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUBP1P53384 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.5■□□□□ 0.55
NUBP1P53384 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NUBP1P53384 TREX1-205ENST00000625293 1783 ntBASIC18.5■□□□□ 0.55
NUBP1P53384 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.5■□□□□ 0.55
NUBP1P53384 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.49■□□□□ 0.55
NUBP1P53384 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NUBP1P53384 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.49■□□□□ 0.55
NUBP1P53384 ZNF815P-204ENST00000434898 1737 ntBASIC18.49■□□□□ 0.55
NUBP1P53384 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
NUBP1P53384 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NUBP1P53384 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NUBP1P53384 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.49■□□□□ 0.55
NUBP1P53384 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 PSMC1P2-201ENST00000423961 1204 ntBASIC18.49■□□□□ 0.55
NUBP1P53384 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.49■□□□□ 0.55
NUBP1P53384 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.49■□□□□ 0.55
NUBP1P53384 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.49■□□□□ 0.55
NUBP1P53384 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.49■□□□□ 0.55
NUBP1P53384 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.49■□□□□ 0.55
NUBP1P53384 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.49■□□□□ 0.55
NUBP1P53384 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.49■□□□□ 0.55
NUBP1P53384 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.49■□□□□ 0.55
NUBP1P53384 AC105339.3-201ENST00000560043 636 ntBASIC18.49■□□□□ 0.55
NUBP1P53384 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.49■□□□□ 0.55
NUBP1P53384 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.49■□□□□ 0.55
NUBP1P53384 AL596442.2-201ENST00000610240 980 ntBASIC18.49■□□□□ 0.55
NUBP1P53384 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NUBP1P53384 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.49■□□□□ 0.55
NUBP1P53384 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUBP1P53384 AC034236.2-201ENST00000606662 1610 ntBASIC18.49■□□□□ 0.55
NUBP1P53384 AC112777.1-201ENST00000540175 1423 ntBASIC18.49■□□□□ 0.55
NUBP1P53384 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NUBP1P53384 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NUBP1P53384 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NUBP1P53384 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUBP1P53384 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUBP1P53384 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NUBP1P53384 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.48■□□□□ 0.55
NUBP1P53384 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUBP1P53384 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUBP1P53384 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUBP1P53384 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NUBP1P53384 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.48■□□□□ 0.55
NUBP1P53384 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.48■□□□□ 0.55
NUBP1P53384 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.48■□□□□ 0.55
NUBP1P53384 AC055748.1-201ENST00000489836 959 ntBASIC18.48■□□□□ 0.55
NUBP1P53384 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.48■□□□□ 0.55
NUBP1P53384 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms