Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIR3180-5-201ENST00000583743 153 ntBASIC18.06■□□□□ 0.48
PDX1P52945 AC079602.3-201ENST00000623931 403 ntBASIC18.06■□□□□ 0.48
PDX1P52945 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.06■□□□□ 0.48
PDX1P52945 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.06■□□□□ 0.48
PDX1P52945 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.06■□□□□ 0.48
PDX1P52945 AC018445.3-201ENST00000624177 1945 ntBASIC18.06■□□□□ 0.48
PDX1P52945 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.06■□□□□ 0.48
PDX1P52945 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.05■□□□□ 0.48
PDX1P52945 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.05■□□□□ 0.48
PDX1P52945 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 MCCD1P1-208ENST00000445732 328 ntBASIC18.05■□□□□ 0.48
PDX1P52945 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.05■□□□□ 0.48
PDX1P52945 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PDX1P52945 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PDX1P52945 MIR3652-201ENST00000579335 131 ntBASIC18.05■□□□□ 0.48
PDX1P52945 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.05■□□□□ 0.48
PDX1P52945 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.05■□□□□ 0.48
PDX1P52945 AC092329.2-201ENST00000598402 547 ntBASIC18.05■□□□□ 0.48
PDX1P52945 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.05■□□□□ 0.48
PDX1P52945 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PDX1P52945 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.05■□□□□ 0.48
PDX1P52945 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PDX1P52945 AC098818.2-201ENST00000564925 2320 ntBASIC18.05■□□□□ 0.48
PDX1P52945 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PDX1P52945 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.05■□□□□ 0.48
PDX1P52945 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PDX1P52945 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDX1P52945 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.04■□□□□ 0.48
PDX1P52945 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDX1P52945 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.04■□□□□ 0.48
PDX1P52945 AC246785.2-201ENST00000432512 513 ntBASIC18.04■□□□□ 0.48
PDX1P52945 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.04■□□□□ 0.48
PDX1P52945 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 PRELID1P1-202ENST00000567272 903 ntBASIC18.04■□□□□ 0.48
PDX1P52945 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
PDX1P52945 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
PDX1P52945 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PDX1P52945 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 AP000974.1-201ENST00000623909 2387 ntBASIC18.04■□□□□ 0.48
PDX1P52945 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDX1P52945 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.03■□□□□ 0.48
PDX1P52945 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.03■□□□□ 0.48
PDX1P52945 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDX1P52945 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDX1P52945 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.03■□□□□ 0.48
PDX1P52945 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDX1P52945 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.03■□□□□ 0.48
PDX1P52945 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.03■□□□□ 0.48
PDX1P52945 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDX1P52945 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDX1P52945 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDX1P52945 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDX1P52945 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDX1P52945 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDX1P52945 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
PDX1P52945 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.03■□□□□ 0.48
PDX1P52945 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PDX1P52945 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.03■□□□□ 0.48
PDX1P52945 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.03■□□□□ 0.48
PDX1P52945 AL121672.3-201ENST00000608644 468 ntBASIC18.03■□□□□ 0.48
PDX1P52945 AL157888.1-201ENST00000631930 593 ntBASIC18.03■□□□□ 0.48
PDX1P52945 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDX1P52945 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PDX1P52945 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PDX1P52945 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDX1P52945 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDX1P52945 AL162741.1-201ENST00000565563 1558 ntBASIC18.03■□□□□ 0.48
PDX1P52945 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.03■□□□□ 0.48
PDX1P52945 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.03■□□□□ 0.48
PDX1P52945 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDX1P52945 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.02■□□□□ 0.48
PDX1P52945 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PDX1P52945 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PDX1P52945 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms