Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.03■□□□□ 0.32
RFC3P40938 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.03■□□□□ 0.32
RFC3P40938 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
RFC3P40938 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.03■□□□□ 0.32
RFC3P40938 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.03■□□□□ 0.32
RFC3P40938 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.03■□□□□ 0.32
RFC3P40938 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.03■□□□□ 0.32
RFC3P40938 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RFC3P40938 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.03■□□□□ 0.32
RFC3P40938 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RFC3P40938 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.03■□□□□ 0.32
RFC3P40938 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFC3P40938 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RFC3P40938 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RFC3P40938 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC3P40938 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC3P40938 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RFC3P40938 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC3P40938 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC3P40938 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC3P40938 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC3P40938 AC098818.2-201ENST00000564925 2320 ntBASIC17.02■□□□□ 0.32
RFC3P40938 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.02■□□□□ 0.32
RFC3P40938 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RFC3P40938 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RFC3P40938 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.02■□□□□ 0.32
RFC3P40938 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC3P40938 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.02■□□□□ 0.32
RFC3P40938 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.02■□□□□ 0.32
RFC3P40938 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.02■□□□□ 0.32
RFC3P40938 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFC3P40938 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.02■□□□□ 0.32
RFC3P40938 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.02■□□□□ 0.32
RFC3P40938 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.02■□□□□ 0.32
RFC3P40938 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.02■□□□□ 0.32
RFC3P40938 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.02■□□□□ 0.32
RFC3P40938 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
RFC3P40938 AC112497.1-201ENST00000624824 639 ntBASIC17.02■□□□□ 0.32
RFC3P40938 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFC3P40938 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC3P40938 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC3P40938 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RFC3P40938 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFC3P40938 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFC3P40938 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
RFC3P40938 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
RFC3P40938 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.01■□□□□ 0.31
RFC3P40938 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RFC3P40938 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RFC3P40938 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.01■□□□□ 0.31
RFC3P40938 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RFC3P40938 FP475955.4-201ENST00000623131 1990 ntBASIC17.01■□□□□ 0.31
RFC3P40938 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.01■□□□□ 0.31
RFC3P40938 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RFC3P40938 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.01■□□□□ 0.31
RFC3P40938 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 SPDYE13P-201ENST00000445314 798 ntBASIC17.01■□□□□ 0.31
RFC3P40938 AC034232.1-201ENST00000506026 1064 ntBASIC17.01■□□□□ 0.31
RFC3P40938 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.01■□□□□ 0.31
RFC3P40938 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.01■□□□□ 0.31
RFC3P40938 AC116407.4-201ENST00000623319 1061 ntBASIC17.01■□□□□ 0.31
RFC3P40938 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.01■□□□□ 0.31
RFC3P40938 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.01■□□□□ 0.31
RFC3P40938 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.01■□□□□ 0.31
RFC3P40938 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.01■□□□□ 0.31
RFC3P40938 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.01■□□□□ 0.31
RFC3P40938 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RFC3P40938 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.01■□□□□ 0.31
RFC3P40938 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFC3P40938 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.01■□□□□ 0.31
RFC3P40938 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RFC3P40938 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RFC3P40938 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFC3P40938 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms