Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP8P40818 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP8P40818 AL031598.1-201ENST00000561511 1773 ntBASIC20.27■□□□□ 0.84
USP8P40818 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP8P40818 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP8P40818 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP8P40818 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP8P40818 AC012618.2-201ENST00000428058 849 ntBASIC20.27■□□□□ 0.84
USP8P40818 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP8P40818 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP8P40818 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.27■□□□□ 0.84
USP8P40818 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.27■□□□□ 0.84
USP8P40818 AC233702.5-201ENST00000584107 538 ntBASIC20.27■□□□□ 0.84
USP8P40818 AC083906.6-201ENST00000641366 219 ntBASIC20.27■□□□□ 0.84
USP8P40818 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.27■□□□□ 0.84
USP8P40818 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
USP8P40818 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.27■□□□□ 0.84
USP8P40818 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP8P40818 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP8P40818 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.27■□□□□ 0.83
USP8P40818 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.27■□□□□ 0.83
USP8P40818 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP8P40818 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.26■□□□□ 0.83
USP8P40818 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
USP8P40818 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
USP8P40818 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP8P40818 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
USP8P40818 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
USP8P40818 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
USP8P40818 MESTP1-201ENST00000404287 994 ntBASIC20.26■□□□□ 0.83
USP8P40818 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.26■□□□□ 0.83
USP8P40818 NUDT16P1-203ENST00000513809 620 ntBASIC20.26■□□□□ 0.83
USP8P40818 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.26■□□□□ 0.83
USP8P40818 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.26■□□□□ 0.83
USP8P40818 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.26■□□□□ 0.83
USP8P40818 CKBP1-201ENST00000565489 1086 ntBASIC20.26■□□□□ 0.83
USP8P40818 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.26■□□□□ 0.83
USP8P40818 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP8P40818 AC104581.1-202ENST00000635932 2618 ntBASIC20.26■□□□□ 0.83
USP8P40818 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USP8P40818 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP8P40818 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
USP8P40818 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP8P40818 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP8P40818 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
USP8P40818 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP8P40818 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP8P40818 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP8P40818 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.26■□□□□ 0.83
USP8P40818 Z98044.1-201ENST00000632503 1764 ntBASIC20.26■□□□□ 0.83
USP8P40818 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP8P40818 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP8P40818 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.26■□□□□ 0.83
USP8P40818 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP8P40818 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
USP8P40818 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP8P40818 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
USP8P40818 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.25■□□□□ 0.83
USP8P40818 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP8P40818 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.25■□□□□ 0.83
USP8P40818 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.25■□□□□ 0.83
USP8P40818 AL355355.2-201ENST00000442321 338 ntBASIC20.25■□□□□ 0.83
USP8P40818 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
USP8P40818 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.25■□□□□ 0.83
USP8P40818 SLC25A1P4-201ENST00000567977 778 ntBASIC20.25■□□□□ 0.83
USP8P40818 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP8P40818 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
USP8P40818 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP8P40818 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.25■□□□□ 0.83
USP8P40818 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP8P40818 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP8P40818 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP8P40818 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP8P40818 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USP8P40818 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.24■□□□□ 0.83
USP8P40818 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
USP8P40818 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
USP8P40818 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USP8P40818 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
USP8P40818 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.24■□□□□ 0.83
USP8P40818 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.24■□□□□ 0.83
USP8P40818 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 AC008550.1-201ENST00000511500 884 ntBASIC20.24■□□□□ 0.83
USP8P40818 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.24■□□□□ 0.83
USP8P40818 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.24■□□□□ 0.83
USP8P40818 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 WIZP1-201ENST00000531444 2299 ntBASIC20.24■□□□□ 0.83
USP8P40818 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP8P40818 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP8P40818 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms