Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.18■□□□□ 0.98
CLCN1P35523 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.18■□□□□ 0.98
CLCN1P35523 AC097658.1-201ENST00000475555 843 ntBASIC21.18■□□□□ 0.98
CLCN1P35523 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.18■□□□□ 0.98
CLCN1P35523 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.18■□□□□ 0.98
CLCN1P35523 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CLCN1P35523 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CLCN1P35523 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CLCN1P35523 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCN1P35523 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
CLCN1P35523 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.18■□□□□ 0.98
CLCN1P35523 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CLCN1P35523 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.17■□□□□ 0.98
CLCN1P35523 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CLCN1P35523 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CLCN1P35523 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CLCN1P35523 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CLCN1P35523 AC073210.2-201ENST00000430369 194 ntBASIC21.17■□□□□ 0.98
CLCN1P35523 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.17■□□□□ 0.98
CLCN1P35523 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CLCN1P35523 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.17■□□□□ 0.98
CLCN1P35523 AC142086.2-201ENST00000569753 217 ntBASIC21.17■□□□□ 0.98
CLCN1P35523 AC083880.1-201ENST00000608266 535 ntBASIC21.17■□□□□ 0.98
CLCN1P35523 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CLCN1P35523 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.17■□□□□ 0.98
CLCN1P35523 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.17■□□□□ 0.98
CLCN1P35523 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCN1P35523 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
CLCN1P35523 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCN1P35523 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC21.16■□□□□ 0.98
CLCN1P35523 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCN1P35523 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCN1P35523 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCN1P35523 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.16■□□□□ 0.98
CLCN1P35523 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CLCN1P35523 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCN1P35523 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC21.15■□□□□ 0.98
CLCN1P35523 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.15■□□□□ 0.98
CLCN1P35523 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
CLCN1P35523 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CLCN1P35523 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.15■□□□□ 0.98
CLCN1P35523 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.15■□□□□ 0.98
CLCN1P35523 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.15■□□□□ 0.98
CLCN1P35523 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.15■□□□□ 0.98
CLCN1P35523 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
CLCN1P35523 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCN1P35523 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.15■□□□□ 0.98
CLCN1P35523 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLCN1P35523 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLCN1P35523 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms