Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA3P29320 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA3P29320 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA3P29320 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA3P29320 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.14■□□□□ 0.49
EPHA3P29320 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHA3P29320 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
EPHA3P29320 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHA3P29320 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA3P29320 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
EPHA3P29320 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
EPHA3P29320 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHA3P29320 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA3P29320 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA3P29320 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
EPHA3P29320 Z85996.1-201ENST00000494644 937 ntBASIC18.13■□□□□ 0.49
EPHA3P29320 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.13■□□□□ 0.49
EPHA3P29320 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.13■□□□□ 0.49
EPHA3P29320 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA3P29320 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA3P29320 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHA3P29320 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA3P29320 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA3P29320 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
EPHA3P29320 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHA3P29320 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
EPHA3P29320 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
EPHA3P29320 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA3P29320 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHA3P29320 LINC00896-202ENST00000609602 2128 ntBASIC18.13■□□□□ 0.49
EPHA3P29320 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHA3P29320 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
EPHA3P29320 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 AL357033.4-201ENST00000617703 1807 ntBASIC18.12■□□□□ 0.49
EPHA3P29320 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 POU5F1P3-201ENST00000428824 1078 ntBASIC18.12■□□□□ 0.49
EPHA3P29320 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHA3P29320 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHA3P29320 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.12■□□□□ 0.49
EPHA3P29320 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHA3P29320 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.12■□□□□ 0.49
EPHA3P29320 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHA3P29320 AC004264.1-201ENST00000608354 794 ntBASIC18.12■□□□□ 0.49
EPHA3P29320 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHA3P29320 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHA3P29320 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
EPHA3P29320 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.12■□□□□ 0.49
EPHA3P29320 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
EPHA3P29320 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHA3P29320 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
EPHA3P29320 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHA3P29320 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHA3P29320 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHA3P29320 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHA3P29320 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
EPHA3P29320 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.12■□□□□ 0.49
EPHA3P29320 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.12■□□□□ 0.49
EPHA3P29320 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHA3P29320 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EPHA3P29320 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHA3P29320 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHA3P29320 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHA3P29320 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
EPHA3P29320 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHA3P29320 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHA3P29320 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EPHA3P29320 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
EPHA3P29320 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHA3P29320 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.11■□□□□ 0.49
EPHA3P29320 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHA3P29320 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
EPHA3P29320 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHA3P29320 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHA3P29320 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EPHA3P29320 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHA3P29320 MYC-208ENST00000641036 567 ntBASIC18.11■□□□□ 0.49
EPHA3P29320 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHA3P29320 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHA3P29320 KRT8P11-201ENST00000409686 1436 ntBASIC18.11■□□□□ 0.49
EPHA3P29320 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
EPHA3P29320 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.11■□□□□ 0.49
EPHA3P29320 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHA3P29320 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EPHA3P29320 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHA3P29320 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.11■□□□□ 0.49
EPHA3P29320 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EPHA3P29320 BCL2-203ENST00000589955 5011 ntBASIC18.11■□□□□ 0.49
EPHA3P29320 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EPHA3P29320 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHA3P29320 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EPHA3P29320 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms