Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GDF1P27539 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.89■□□□□ 0.29
GDF1P27539 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GDF1P27539 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.88■□□□□ 0.29
GDF1P27539 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GDF1P27539 HOXB1-202ENST00000577092 1414 ntBASIC16.88■□□□□ 0.29
GDF1P27539 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.88■□□□□ 0.29
GDF1P27539 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 VENTXP5-201ENST00000523979 775 ntBASIC16.88■□□□□ 0.29
GDF1P27539 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.88■□□□□ 0.29
GDF1P27539 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.88■□□□□ 0.29
GDF1P27539 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.88■□□□□ 0.29
GDF1P27539 AC006333.2-201ENST00000607957 2099 ntBASIC16.88■□□□□ 0.29
GDF1P27539 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.88■□□□□ 0.29
GDF1P27539 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.88■□□□□ 0.29
GDF1P27539 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.88■□□□□ 0.29
GDF1P27539 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GDF1P27539 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GDF1P27539 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.87■□□□□ 0.29
GDF1P27539 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.87■□□□□ 0.29
GDF1P27539 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.87■□□□□ 0.29
GDF1P27539 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.87■□□□□ 0.29
GDF1P27539 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GDF1P27539 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GDF1P27539 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
GDF1P27539 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.87■□□□□ 0.29
GDF1P27539 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.87■□□□□ 0.29
GDF1P27539 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.87■□□□□ 0.29
GDF1P27539 AL157888.1-201ENST00000631930 593 ntBASIC16.87■□□□□ 0.29
GDF1P27539 AC083906.6-201ENST00000641366 219 ntBASIC16.87■□□□□ 0.29
GDF1P27539 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.87■□□□□ 0.29
GDF1P27539 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
GDF1P27539 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.87■□□□□ 0.29
GDF1P27539 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
GDF1P27539 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 Z98044.1-201ENST00000632503 1764 ntBASIC16.87■□□□□ 0.29
GDF1P27539 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
GDF1P27539 AL357033.4-201ENST00000617703 1807 ntBASIC16.86■□□□□ 0.29
GDF1P27539 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 PCED1CP-201ENST00000419887 785 ntBASIC16.86■□□□□ 0.29
GDF1P27539 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.86■□□□□ 0.29
GDF1P27539 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.86■□□□□ 0.29
GDF1P27539 AC104390.1-201ENST00000555663 520 ntBASIC16.86■□□□□ 0.29
GDF1P27539 ZNF444P1-201ENST00000559497 298 ntBASIC16.86■□□□□ 0.29
GDF1P27539 MIR3917-201ENST00000580971 93 ntBASIC16.86■□□□□ 0.29
GDF1P27539 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 AC010240.3-201ENST00000607688 395 ntBASIC16.86■□□□□ 0.29
GDF1P27539 AC083849.1-201ENST00000615227 514 ntBASIC16.86■□□□□ 0.29
GDF1P27539 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.86■□□□□ 0.29
GDF1P27539 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
GDF1P27539 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.86■□□□□ 0.29
GDF1P27539 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
GDF1P27539 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.86■□□□□ 0.29
GDF1P27539 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
GDF1P27539 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms