Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 CR769767.2-201ENST00000622735 460 ntBASIC18.78■□□□□ 0.6
HLA-DPA1P20036 AC073912.3-201ENST00000624414 853 ntBASIC18.78■□□□□ 0.6
HLA-DPA1P20036 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DPA1P20036 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DPA1P20036 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-DPA1P20036 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-DPA1P20036 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
HLA-DPA1P20036 AC073592.3-201ENST00000625118 1834 ntBASIC18.77■□□□□ 0.59
HLA-DPA1P20036 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 AL499627.1-201ENST00000569373 2188 ntBASIC18.76■□□□□ 0.59
HLA-DPA1P20036 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 INGX-201ENST00000359239 846 ntBASIC18.76■□□□□ 0.59
HLA-DPA1P20036 AP000593.1-201ENST00000393668 712 ntBASIC18.76■□□□□ 0.59
HLA-DPA1P20036 AC087499.1-201ENST00000418141 1075 ntBASIC18.76■□□□□ 0.59
HLA-DPA1P20036 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 LINC01568-207ENST00000641790 1380 ntBASIC18.76■□□□□ 0.59
HLA-DPA1P20036 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
HLA-DPA1P20036 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 AL512604.3-201ENST00000569583 964 ntBASIC18.75■□□□□ 0.59
HLA-DPA1P20036 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 FAM87A-204ENST00000613235 858 ntBASIC18.75■□□□□ 0.59
HLA-DPA1P20036 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HLA-DPA1P20036 KRT8P7-201ENST00000533003 1432 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms