Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VCLP18206 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
VCLP18206 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCLP18206 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.72■□□□□ 0.59
VCLP18206 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VCLP18206 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.72■□□□□ 0.59
VCLP18206 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCLP18206 ECEL1P3-201ENST00000427961 737 ntBASIC18.72■□□□□ 0.59
VCLP18206 TSPY23P-201ENST00000440136 739 ntBASIC18.72■□□□□ 0.59
VCLP18206 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.72■□□□□ 0.59
VCLP18206 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.72■□□□□ 0.59
VCLP18206 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.72■□□□□ 0.59
VCLP18206 AC010947.1-201ENST00000623454 693 ntBASIC18.72■□□□□ 0.59
VCLP18206 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.72■□□□□ 0.59
VCLP18206 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
VCLP18206 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.72■□□□□ 0.59
VCLP18206 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
VCLP18206 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.72■□□□□ 0.59
VCLP18206 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCLP18206 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.72■□□□□ 0.59
VCLP18206 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VCLP18206 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
VCLP18206 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCLP18206 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCLP18206 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VCLP18206 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
VCLP18206 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCLP18206 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
VCLP18206 TSPY17P-201ENST00000450329 467 ntBASIC18.71■□□□□ 0.59
VCLP18206 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.71■□□□□ 0.59
VCLP18206 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.71■□□□□ 0.59
VCLP18206 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
VCLP18206 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.71■□□□□ 0.59
VCLP18206 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
VCLP18206 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCLP18206 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.71■□□□□ 0.59
VCLP18206 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.71■□□□□ 0.59
VCLP18206 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VCLP18206 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
VCLP18206 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VCLP18206 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
VCLP18206 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
VCLP18206 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.7■□□□□ 0.58
VCLP18206 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.7■□□□□ 0.58
VCLP18206 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
VCLP18206 FEM1AP3-201ENST00000403722 1741 ntBASIC18.7■□□□□ 0.58
VCLP18206 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
VCLP18206 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.7■□□□□ 0.58
VCLP18206 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.7■□□□□ 0.58
VCLP18206 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
VCLP18206 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
VCLP18206 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.7■□□□□ 0.58
VCLP18206 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.7■□□□□ 0.58
VCLP18206 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.7■□□□□ 0.58
VCLP18206 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VCLP18206 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.7■□□□□ 0.58
VCLP18206 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
VCLP18206 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
VCLP18206 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
VCLP18206 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.69■□□□□ 0.58
VCLP18206 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.69■□□□□ 0.58
VCLP18206 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.69■□□□□ 0.58
VCLP18206 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.69■□□□□ 0.58
VCLP18206 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.69■□□□□ 0.58
VCLP18206 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.69■□□□□ 0.58
VCLP18206 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.69■□□□□ 0.58
VCLP18206 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 AC012306.2-201ENST00000609350 630 ntBASIC18.69■□□□□ 0.58
VCLP18206 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
VCLP18206 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.69■□□□□ 0.58
VCLP18206 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.69■□□□□ 0.58
VCLP18206 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.69■□□□□ 0.58
VCLP18206 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VCLP18206 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
VCLP18206 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms