Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CFTRP13569 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CFTRP13569 PNMT-203ENST00000581428 677 ntTSL 2 BASIC31.84■■■□□ 2.69
CFTRP13569 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CFTRP13569 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CFTRP13569 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CFTRP13569 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CFTRP13569 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CFTRP13569 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CFTRP13569 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
CFTRP13569 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC31.84■■■□□ 2.69
CFTRP13569 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CFTRP13569 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC31.84■■■□□ 2.69
CFTRP13569 AC004967.1-201ENST00000453589 447 ntBASIC31.84■■■□□ 2.69
CFTRP13569 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC31.84■■■□□ 2.69
CFTRP13569 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC31.84■■■□□ 2.69
CFTRP13569 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
CFTRP13569 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CFTRP13569 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CFTRP13569 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CFTRP13569 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
CFTRP13569 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CFTRP13569 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CFTRP13569 HNRNPA1P28-201ENST00000424481 961 ntBASIC31.83■■■□□ 2.69
CFTRP13569 RPS2P1-201ENST00000434010 821 ntBASIC31.83■■■□□ 2.69
CFTRP13569 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CFTRP13569 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC31.83■■■□□ 2.69
CFTRP13569 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CFTRP13569 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC31.83■■■□□ 2.69
CFTRP13569 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
CFTRP13569 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CFTRP13569 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CFTRP13569 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC31.82■■■□□ 2.69
CFTRP13569 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.69
CFTRP13569 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC31.82■■■□□ 2.69
CFTRP13569 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CFTRP13569 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CFTRP13569 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC31.82■■■□□ 2.68
CFTRP13569 RPS2P28-201ENST00000314255 741 ntBASIC31.82■■■□□ 2.68
CFTRP13569 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CFTRP13569 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC31.82■■■□□ 2.68
CFTRP13569 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC31.82■■■□□ 2.68
CFTRP13569 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC31.82■■■□□ 2.68
CFTRP13569 AP005117.1-201ENST00000584346 1413 ntBASIC31.82■■■□□ 2.68
CFTRP13569 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CFTRP13569 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC31.82■■■□□ 2.68
CFTRP13569 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
CFTRP13569 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CFTRP13569 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC31.81■■■□□ 2.68
CFTRP13569 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
CFTRP13569 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
CFTRP13569 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC31.81■■■□□ 2.68
CFTRP13569 DANCR-204ENST00000444958 709 ntTSL 3 BASIC31.81■■■□□ 2.68
CFTRP13569 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC31.81■■■□□ 2.68
CFTRP13569 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CFTRP13569 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC31.81■■■□□ 2.68
CFTRP13569 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
CFTRP13569 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
CFTRP13569 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC31.81■■■□□ 2.68
CFTRP13569 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC31.8■■■□□ 2.68
CFTRP13569 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CFTRP13569 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CFTRP13569 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC31.8■■■□□ 2.68
CFTRP13569 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CFTRP13569 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
CFTRP13569 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC31.8■■■□□ 2.68
CFTRP13569 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
CFTRP13569 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
CFTRP13569 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
CFTRP13569 AC092667.1-201ENST00000434301 2586 ntBASIC31.79■■■□□ 2.68
CFTRP13569 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CFTRP13569 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CFTRP13569 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CFTRP13569 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC31.79■■■□□ 2.68
CFTRP13569 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC31.79■■■□□ 2.68
CFTRP13569 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC31.78■■■□□ 2.68
CFTRP13569 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
CFTRP13569 MTMR9LP-203ENST00000426597 1545 ntBASIC31.78■■■□□ 2.68
CFTRP13569 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CFTRP13569 AC004832.2-201ENST00000426397 482 ntBASIC31.78■■■□□ 2.68
CFTRP13569 RNA5SP415-201ENST00000517246 115 ntBASIC31.78■■■□□ 2.68
CFTRP13569 AC040169.1-201ENST00000565382 521 ntBASIC31.78■■■□□ 2.68
CFTRP13569 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC31.78■■■□□ 2.68
CFTRP13569 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CFTRP13569 AC008735.5-201ENST00000623544 497 ntBASIC31.78■■■□□ 2.68
CFTRP13569 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC31.78■■■□□ 2.68
CFTRP13569 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC31.78■■■□□ 2.68
CFTRP13569 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC31.78■■■□□ 2.68
CFTRP13569 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CFTRP13569 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CFTRP13569 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC31.78■■■□□ 2.68
CFTRP13569 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC31.78■■■□□ 2.68
CFTRP13569 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC31.78■■■□□ 2.68
CFTRP13569 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
CFTRP13569 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CFTRP13569 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
CFTRP13569 NARF-204ENST00000390006 1766 ntTSL 2 BASIC31.77■■■□□ 2.68
CFTRP13569 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CFTRP13569 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
CFTRP13569 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms