Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH1P12830 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH1P12830 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH1P12830 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CDH1P12830 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH1P12830 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.15■□□□□ 0.5
CDH1P12830 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.15■□□□□ 0.5
CDH1P12830 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH1P12830 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH1P12830 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH1P12830 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.15■□□□□ 0.5
CDH1P12830 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH1P12830 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH1P12830 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CDH1P12830 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH1P12830 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDH1P12830 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH1P12830 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CDH1P12830 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH1P12830 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH1P12830 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH1P12830 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH1P12830 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH1P12830 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CDH1P12830 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.14■□□□□ 0.5
CDH1P12830 CYP2D8P-201ENST00000433633 1490 ntBASIC18.14■□□□□ 0.5
CDH1P12830 KRT8P32-201ENST00000512863 1461 ntBASIC18.14■□□□□ 0.5
CDH1P12830 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.14■□□□□ 0.5
CDH1P12830 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
CDH1P12830 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH1P12830 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 MMP23A-201ENST00000234610 1017 ntBASIC18.14■□□□□ 0.49
CDH1P12830 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH1P12830 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH1P12830 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH1P12830 BX088651.1-201ENST00000540551 451 ntBASIC18.14■□□□□ 0.49
CDH1P12830 C2orf69P3-201ENST00000565542 1120 ntBASIC18.14■□□□□ 0.49
CDH1P12830 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CDH1P12830 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.14■□□□□ 0.49
CDH1P12830 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 AL354751.1-201ENST00000412768 1863 ntBASIC18.14■□□□□ 0.49
CDH1P12830 AC018470.1-201ENST00000624790 3129 ntBASIC18.14■□□□□ 0.49
CDH1P12830 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH1P12830 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH1P12830 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH1P12830 RCC2P3-201ENST00000418112 1537 ntBASIC18.13■□□□□ 0.49
CDH1P12830 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH1P12830 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDH1P12830 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 HEIH-201ENST00000623091 1652 ntBASIC18.13■□□□□ 0.49
CDH1P12830 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH1P12830 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH1P12830 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CDH1P12830 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH1P12830 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH1P12830 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH1P12830 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH1P12830 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH1P12830 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
CDH1P12830 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH1P12830 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDH1P12830 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CDH1P12830 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH1P12830 SLC25A1P2-201ENST00000430693 912 ntBASIC18.12■□□□□ 0.49
CDH1P12830 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH1P12830 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH1P12830 NAPSB-206ENST00000562112 1266 ntBASIC18.12■□□□□ 0.49
CDH1P12830 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH1P12830 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH1P12830 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.12■□□□□ 0.49
CDH1P12830 AC068587.9-201ENST00000641814 219 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms