Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
CD28P10747 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.55□□□□□ -0.08
CD28P10747 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.55□□□□□ -0.08
CD28P10747 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.55□□□□□ -0.08
CD28P10747 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.55□□□□□ -0.08
CD28P10747 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 ATP5G2P1-201ENST00000433580 426 ntBASIC14.55□□□□□ -0.08
CD28P10747 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD28P10747 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.55□□□□□ -0.08
CD28P10747 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.55□□□□□ -0.08
CD28P10747 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.55□□□□□ -0.08
CD28P10747 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
CD28P10747 AC011498.5-201ENST00000592027 486 ntBASIC14.55□□□□□ -0.08
CD28P10747 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CD28P10747 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.55□□□□□ -0.08
CD28P10747 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CD28P10747 AC079602.3-201ENST00000623931 403 ntBASIC14.55□□□□□ -0.08
CD28P10747 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.55□□□□□ -0.08
CD28P10747 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CD28P10747 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.55□□□□□ -0.08
CD28P10747 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.55□□□□□ -0.08
CD28P10747 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CD28P10747 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CD28P10747 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CD28P10747 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CD28P10747 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CD28P10747 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.54□□□□□ -0.08
CD28P10747 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CD28P10747 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.54□□□□□ -0.08
CD28P10747 KRT18P23-201ENST00000435622 1283 ntBASIC14.54□□□□□ -0.08
CD28P10747 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.54□□□□□ -0.08
CD28P10747 BX276092.5-203ENST00000456199 560 ntBASIC14.54□□□□□ -0.08
CD28P10747 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.54□□□□□ -0.08
CD28P10747 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.54□□□□□ -0.08
CD28P10747 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.54□□□□□ -0.08
CD28P10747 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CD28P10747 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.54□□□□□ -0.08
CD28P10747 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CD28P10747 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.54□□□□□ -0.08
CD28P10747 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.54□□□□□ -0.08
CD28P10747 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.54□□□□□ -0.08
CD28P10747 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD28P10747 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CD28P10747 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.53□□□□□ -0.08
CD28P10747 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CD28P10747 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 AL109659.2-201ENST00000606809 1674 ntBASIC14.53□□□□□ -0.08
CD28P10747 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CD28P10747 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.53□□□□□ -0.08
CD28P10747 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CD28P10747 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.53□□□□□ -0.08
CD28P10747 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CD28P10747 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.53□□□□□ -0.08
CD28P10747 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD28P10747 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.53□□□□□ -0.08
CD28P10747 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms