Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD48P09326 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CD48P09326 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.31■□□□□ 0.68
CD48P09326 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CD48P09326 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CD48P09326 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.31■□□□□ 0.68
CD48P09326 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.31■□□□□ 0.68
CD48P09326 MIR564-202ENST00000385049 94 ntBASIC19.31■□□□□ 0.68
CD48P09326 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.31■□□□□ 0.68
CD48P09326 AP003041.3-201ENST00000527151 707 ntBASIC19.31■□□□□ 0.68
CD48P09326 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.31■□□□□ 0.68
CD48P09326 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.31■□□□□ 0.68
CD48P09326 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.31■□□□□ 0.68
CD48P09326 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
CD48P09326 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CD48P09326 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD48P09326 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.3■□□□□ 0.68
CD48P09326 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD48P09326 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD48P09326 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD48P09326 INGX-201ENST00000359239 846 ntBASIC19.3■□□□□ 0.68
CD48P09326 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CD48P09326 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD48P09326 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
CD48P09326 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.3■□□□□ 0.68
CD48P09326 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD48P09326 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.3■□□□□ 0.68
CD48P09326 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD48P09326 AC112777.1-201ENST00000540175 1423 ntBASIC19.3■□□□□ 0.68
CD48P09326 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.3■□□□□ 0.68
CD48P09326 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD48P09326 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CD48P09326 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.3■□□□□ 0.68
CD48P09326 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD48P09326 AC018470.1-201ENST00000624790 3129 ntBASIC19.29■□□□□ 0.68
CD48P09326 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 KRT17P2-201ENST00000300992 1314 ntBASIC19.29■□□□□ 0.68
CD48P09326 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CD48P09326 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 AC036111.1-201ENST00000533973 1582 ntBASIC19.29■□□□□ 0.68
CD48P09326 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.29■□□□□ 0.68
CD48P09326 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.29■□□□□ 0.68
CD48P09326 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CD48P09326 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 AL596275.1-201ENST00000423464 877 ntBASIC19.29■□□□□ 0.68
CD48P09326 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.29■□□□□ 0.68
CD48P09326 AIRN-201ENST00000601203 4374 ntBASIC19.29■□□□□ 0.68
CD48P09326 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
CD48P09326 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.29■□□□□ 0.68
CD48P09326 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CD48P09326 CYP2D8P-201ENST00000433633 1490 ntBASIC19.28■□□□□ 0.68
CD48P09326 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.28■□□□□ 0.68
CD48P09326 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CD48P09326 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CD48P09326 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.28■□□□□ 0.68
CD48P09326 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.28■□□□□ 0.68
CD48P09326 SLC25A1P2-201ENST00000430693 912 ntBASIC19.28■□□□□ 0.68
CD48P09326 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.28■□□□□ 0.68
CD48P09326 AC093827.2-201ENST00000512654 315 ntBASIC19.28■□□□□ 0.68
CD48P09326 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.28■□□□□ 0.68
CD48P09326 AL353719.1-201ENST00000566847 864 ntBASIC19.28■□□□□ 0.68
CD48P09326 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.28■□□□□ 0.68
CD48P09326 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CD48P09326 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.27■□□□□ 0.68
CD48P09326 MYLKP1-201ENST00000509077 1580 ntBASIC19.27■□□□□ 0.68
CD48P09326 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.27■□□□□ 0.68
CD48P09326 AC092338.2-201ENST00000568827 1415 ntBASIC19.27■□□□□ 0.68
CD48P09326 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms