Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 AC211429.1-201ENST00000415277 523 ntBASIC18.87■□□□□ 0.61
HLA-DQB2P05538 KRT18P23-201ENST00000435622 1283 ntBASIC18.87■□□□□ 0.61
HLA-DQB2P05538 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 MYLKP1-201ENST00000509077 1580 ntBASIC18.87■□□□□ 0.61
HLA-DQB2P05538 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HLA-DQB2P05538 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 HOXB1-202ENST00000577092 1414 ntBASIC18.86■□□□□ 0.61
HLA-DQB2P05538 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 AC010203.1-204ENST00000548782 407 ntBASIC18.86■□□□□ 0.61
HLA-DQB2P05538 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HLA-DQB2P05538 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.85■□□□□ 0.61
HLA-DQB2P05538 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 ECEL1P3-201ENST00000427961 737 ntBASIC18.85■□□□□ 0.61
HLA-DQB2P05538 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 RNF165-205ENST00000588679 2904 ntBASIC18.85■□□□□ 0.61
HLA-DQB2P05538 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DQB2P05538 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DQB2P05538 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms