Protein–RNA interactions for Protein: P04433

IGKV3-11, Immunoglobulin kappa variable 3-11, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-11P04433 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV3-11P04433 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV3-11P04433 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.18■□□□□ 0.34
IGKV3-11P04433 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.18■□□□□ 0.34
IGKV3-11P04433 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.18■□□□□ 0.34
IGKV3-11P04433 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV3-11P04433 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV3-11P04433 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.18■□□□□ 0.34
IGKV3-11P04433 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IGKV3-11P04433 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3-11P04433 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3-11P04433 AL138781.2-201ENST00000617896 1843 ntBASIC17.17■□□□□ 0.34
IGKV3-11P04433 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3-11P04433 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.17■□□□□ 0.34
IGKV3-11P04433 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
IGKV3-11P04433 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3-11P04433 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3-11P04433 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3-11P04433 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3-11P04433 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.17■□□□□ 0.34
IGKV3-11P04433 AL359075.1-203ENST00000462729 1002 ntBASIC17.17■□□□□ 0.34
IGKV3-11P04433 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.17■□□□□ 0.34
IGKV3-11P04433 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.17■□□□□ 0.34
IGKV3-11P04433 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.17■□□□□ 0.34
IGKV3-11P04433 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.17■□□□□ 0.34
IGKV3-11P04433 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.17■□□□□ 0.34
IGKV3-11P04433 AC010331.1-201ENST00000611423 582 ntBASIC17.17■□□□□ 0.34
IGKV3-11P04433 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3-11P04433 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV3-11P04433 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.17■□□□□ 0.34
IGKV3-11P04433 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.16■□□□□ 0.34
IGKV3-11P04433 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
IGKV3-11P04433 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 MIR1224-201ENST00000408193 85 ntBASIC17.16■□□□□ 0.34
IGKV3-11P04433 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.16■□□□□ 0.34
IGKV3-11P04433 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
IGKV3-11P04433 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.16■□□□□ 0.34
IGKV3-11P04433 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 AC004408.2-201ENST00000623613 2777 ntBASIC17.16■□□□□ 0.34
IGKV3-11P04433 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
IGKV3-11P04433 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
IGKV3-11P04433 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV3-11P04433 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
IGKV3-11P04433 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.15■□□□□ 0.34
IGKV3-11P04433 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
IGKV3-11P04433 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 AC009065.1-201ENST00000564055 1225 ntBASIC17.15■□□□□ 0.34
IGKV3-11P04433 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.15■□□□□ 0.34
IGKV3-11P04433 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.15■□□□□ 0.34
IGKV3-11P04433 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
IGKV3-11P04433 HYMAI.1-201ENST00000620949 238 ntBASIC17.15■□□□□ 0.34
IGKV3-11P04433 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.15■□□□□ 0.34
IGKV3-11P04433 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.15■□□□□ 0.34
IGKV3-11P04433 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV3-11P04433 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
IGKV3-11P04433 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.14■□□□□ 0.34
IGKV3-11P04433 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.14■□□□□ 0.33
IGKV3-11P04433 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 NTF6B-201ENST00000591913 560 ntBASIC17.14■□□□□ 0.33
IGKV3-11P04433 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV3-11P04433 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
IGKV3-11P04433 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
IGKV3-11P04433 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.14■□□□□ 0.33
IGKV3-11P04433 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.14■□□□□ 0.33
IGKV3-11P04433 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.14■□□□□ 0.33
IGKV3-11P04433 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms