Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
VTNP04004 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VTNP04004 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VTNP04004 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VTNP04004 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 AC099343.3-201ENST00000605834 2503 ntBASIC20.38■□□□□ 0.85
VTNP04004 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
VTNP04004 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.38■□□□□ 0.85
VTNP04004 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.38■□□□□ 0.85
VTNP04004 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
VTNP04004 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.38■□□□□ 0.85
VTNP04004 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.38■□□□□ 0.85
VTNP04004 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.38■□□□□ 0.85
VTNP04004 MIR3180-4-201ENST00000582223 153 ntBASIC20.38■□□□□ 0.85
VTNP04004 AP002414.4-201ENST00000589764 1148 ntBASIC20.38■□□□□ 0.85
VTNP04004 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.38■□□□□ 0.85
VTNP04004 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.38■□□□□ 0.85
VTNP04004 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.38■□□□□ 0.85
VTNP04004 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 Z83836.1-201ENST00000624605 1642 ntBASIC20.38■□□□□ 0.85
VTNP04004 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
VTNP04004 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.37■□□□□ 0.85
VTNP04004 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VTNP04004 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.37■□□□□ 0.85
VTNP04004 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTNP04004 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTNP04004 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.37■□□□□ 0.85
VTNP04004 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTNP04004 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTNP04004 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.37■□□□□ 0.85
VTNP04004 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.37■□□□□ 0.85
VTNP04004 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTNP04004 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.37■□□□□ 0.85
VTNP04004 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.37■□□□□ 0.85
VTNP04004 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.37■□□□□ 0.85
VTNP04004 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.37■□□□□ 0.85
VTNP04004 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.37■□□□□ 0.85
VTNP04004 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.37■□□□□ 0.85
VTNP04004 AC083906.6-201ENST00000641366 219 ntBASIC20.37■□□□□ 0.85
VTNP04004 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VTNP04004 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
VTNP04004 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTNP04004 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.37■□□□□ 0.85
VTNP04004 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTNP04004 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VTNP04004 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.37■□□□□ 0.85
VTNP04004 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VTNP04004 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.36■□□□□ 0.85
VTNP04004 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.36■□□□□ 0.85
VTNP04004 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
VTNP04004 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.36■□□□□ 0.85
VTNP04004 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
VTNP04004 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.36■□□□□ 0.85
VTNP04004 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 AL450487.1-201ENST00000426799 995 ntBASIC20.36■□□□□ 0.85
VTNP04004 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
VTNP04004 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.36■□□□□ 0.85
VTNP04004 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.36■□□□□ 0.85
VTNP04004 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.36■□□□□ 0.85
VTNP04004 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VTNP04004 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.36■□□□□ 0.85
VTNP04004 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VTNP04004 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
VTNP04004 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VTNP04004 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
VTNP04004 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
VTNP04004 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
VTNP04004 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.35■□□□□ 0.85
VTNP04004 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
VTNP04004 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.35■□□□□ 0.85
VTNP04004 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VTNP04004 CHCHD2P8-201ENST00000429873 447 ntBASIC20.35■□□□□ 0.85
VTNP04004 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.35■□□□□ 0.85
VTNP04004 AP003733.1-201ENST00000491725 852 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms