Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MT-ND3P03897 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MT-ND3P03897 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
MT-ND3P03897 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
MT-ND3P03897 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND3P03897 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MT-ND3P03897 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND3P03897 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.98■□□□□ 0.63
MT-ND3P03897 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND3P03897 TSPY21P-201ENST00000433481 731 ntBASIC18.98■□□□□ 0.63
MT-ND3P03897 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.98■□□□□ 0.63
MT-ND3P03897 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
MT-ND3P03897 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND3P03897 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.98■□□□□ 0.63
MT-ND3P03897 REXO1L12P-201ENST00000622156 912 ntBASIC18.98■□□□□ 0.63
MT-ND3P03897 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
MT-ND3P03897 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND3P03897 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.98■□□□□ 0.63
MT-ND3P03897 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MT-ND3P03897 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.98■□□□□ 0.63
MT-ND3P03897 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
MT-ND3P03897 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.98■□□□□ 0.63
MT-ND3P03897 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.98■□□□□ 0.63
MT-ND3P03897 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
MT-ND3P03897 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.97■□□□□ 0.63
MT-ND3P03897 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MT-ND3P03897 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.97■□□□□ 0.63
MT-ND3P03897 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.97■□□□□ 0.63
MT-ND3P03897 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.97■□□□□ 0.63
MT-ND3P03897 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.97■□□□□ 0.63
MT-ND3P03897 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.97■□□□□ 0.63
MT-ND3P03897 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MT-ND3P03897 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.97■□□□□ 0.63
MT-ND3P03897 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
MT-ND3P03897 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
MT-ND3P03897 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
MT-ND3P03897 LTB4R2-202ENST00000528054 3092 ntBASIC18.97■□□□□ 0.63
MT-ND3P03897 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.97■□□□□ 0.63
MT-ND3P03897 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.97■□□□□ 0.63
MT-ND3P03897 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.97■□□□□ 0.63
MT-ND3P03897 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
MT-ND3P03897 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MT-ND3P03897 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
MT-ND3P03897 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
MT-ND3P03897 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
MT-ND3P03897 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-ND3P03897 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
MT-ND3P03897 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.96■□□□□ 0.63
MT-ND3P03897 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MT-ND3P03897 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MT-ND3P03897 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.96■□□□□ 0.63
MT-ND3P03897 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 AL353807.1-201ENST00000427475 662 ntBASIC18.96■□□□□ 0.63
MT-ND3P03897 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.96■□□□□ 0.63
MT-ND3P03897 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MT-ND3P03897 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms