Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MT-ND1P03886 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.57■□□□□ 0.4
MT-ND1P03886 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MT-ND1P03886 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MT-ND1P03886 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.57■□□□□ 0.4
MT-ND1P03886 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
MT-ND1P03886 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.57■□□□□ 0.4
MT-ND1P03886 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MT-ND1P03886 AC104771.1-201ENST00000603335 964 ntBASIC17.57■□□□□ 0.4
MT-ND1P03886 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.57■□□□□ 0.4
MT-ND1P03886 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MT-ND1P03886 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.57■□□□□ 0.4
MT-ND1P03886 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
MT-ND1P03886 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
MT-ND1P03886 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
MT-ND1P03886 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.56■□□□□ 0.4
MT-ND1P03886 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MT-ND1P03886 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.56■□□□□ 0.4
MT-ND1P03886 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MT-ND1P03886 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 TSPY23P-201ENST00000440136 739 ntBASIC17.56■□□□□ 0.4
MT-ND1P03886 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.56■□□□□ 0.4
MT-ND1P03886 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.56■□□□□ 0.4
MT-ND1P03886 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.56■□□□□ 0.4
MT-ND1P03886 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.56■□□□□ 0.4
MT-ND1P03886 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.56■□□□□ 0.4
MT-ND1P03886 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.56■□□□□ 0.4
MT-ND1P03886 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
MT-ND1P03886 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.56■□□□□ 0.4
MT-ND1P03886 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.56■□□□□ 0.4
MT-ND1P03886 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.56■□□□□ 0.4
MT-ND1P03886 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MT-ND1P03886 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MT-ND1P03886 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.56■□□□□ 0.4
MT-ND1P03886 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-ND1P03886 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-ND1P03886 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MT-ND1P03886 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.55■□□□□ 0.4
MT-ND1P03886 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-ND1P03886 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-ND1P03886 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.55■□□□□ 0.4
MT-ND1P03886 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.55■□□□□ 0.4
MT-ND1P03886 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
MT-ND1P03886 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
MT-ND1P03886 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.55■□□□□ 0.4
MT-ND1P03886 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-ND1P03886 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.55■□□□□ 0.4
MT-ND1P03886 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 HEIH-201ENST00000623091 1652 ntBASIC17.55■□□□□ 0.4
MT-ND1P03886 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MT-ND1P03886 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
MT-ND1P03886 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
MT-ND1P03886 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
MT-ND1P03886 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.54■□□□□ 0.4
MT-ND1P03886 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.54■□□□□ 0.4
MT-ND1P03886 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
MT-ND1P03886 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
MT-ND1P03886 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.54■□□□□ 0.4
MT-ND1P03886 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.54■□□□□ 0.4
MT-ND1P03886 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MT-ND1P03886 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms