Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.42■□□□□ 0.7
LMNAP02545 LINC01311-201ENST00000565162 1445 ntBASIC19.42■□□□□ 0.7
LMNAP02545 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.42■□□□□ 0.7
LMNAP02545 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.42■□□□□ 0.7
LMNAP02545 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.42■□□□□ 0.7
LMNAP02545 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.42■□□□□ 0.7
LMNAP02545 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LMNAP02545 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.42■□□□□ 0.7
LMNAP02545 YBX1P10-201ENST00000444752 975 ntBASIC19.42■□□□□ 0.7
LMNAP02545 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.42■□□□□ 0.7
LMNAP02545 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.42■□□□□ 0.7
LMNAP02545 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LMNAP02545 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.42■□□□□ 0.7
LMNAP02545 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LMNAP02545 TREX1-205ENST00000625293 1783 ntBASIC19.42■□□□□ 0.7
LMNAP02545 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LMNAP02545 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LMNAP02545 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.41■□□□□ 0.7
LMNAP02545 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.41■□□□□ 0.7
LMNAP02545 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 UNC93B7-201ENST00000509439 705 ntBASIC19.41■□□□□ 0.7
LMNAP02545 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.41■□□□□ 0.7
LMNAP02545 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.41■□□□□ 0.7
LMNAP02545 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.41■□□□□ 0.7
LMNAP02545 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.41■□□□□ 0.7
LMNAP02545 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LMNAP02545 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.41■□□□□ 0.7
LMNAP02545 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LMNAP02545 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
LMNAP02545 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 LTB4R2-202ENST00000528054 3092 ntBASIC19.4■□□□□ 0.7
LMNAP02545 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.4■□□□□ 0.7
LMNAP02545 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LMNAP02545 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.4■□□□□ 0.7
LMNAP02545 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 AC009078.2-202ENST00000463353 338 ntBASIC19.4■□□□□ 0.7
LMNAP02545 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.4■□□□□ 0.7
LMNAP02545 MIR2861-201ENST00000636310 90 ntBASIC19.4■□□□□ 0.7
LMNAP02545 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.4■□□□□ 0.7
LMNAP02545 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.4■□□□□ 0.7
LMNAP02545 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.4■□□□□ 0.7
LMNAP02545 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LMNAP02545 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LMNAP02545 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.4■□□□□ 0.7
LMNAP02545 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.4■□□□□ 0.7
LMNAP02545 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LMNAP02545 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LMNAP02545 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.39■□□□□ 0.7
LMNAP02545 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LMNAP02545 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.39■□□□□ 0.7
LMNAP02545 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMNAP02545 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.39■□□□□ 0.69
LMNAP02545 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.39■□□□□ 0.69
LMNAP02545 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LMNAP02545 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms