Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
IFNA1P01562 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.75□□□□□ -0.05
IFNA1P01562 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
IFNA1P01562 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.75□□□□□ -0.05
IFNA1P01562 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.75□□□□□ -0.05
IFNA1P01562 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.75□□□□□ -0.05
IFNA1P01562 AL591742.1-201ENST00000604433 565 ntBASIC14.75□□□□□ -0.05
IFNA1P01562 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.75□□□□□ -0.05
IFNA1P01562 AC105020.6-201ENST00000621523 1217 ntBASIC14.75□□□□□ -0.05
IFNA1P01562 AL035685.1-201ENST00000636663 812 ntBASIC14.75□□□□□ -0.05
IFNA1P01562 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.75□□□□□ -0.05
IFNA1P01562 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.75□□□□□ -0.05
IFNA1P01562 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.75□□□□□ -0.05
IFNA1P01562 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
IFNA1P01562 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
IFNA1P01562 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.74□□□□□ -0.05
IFNA1P01562 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
IFNA1P01562 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
IFNA1P01562 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
IFNA1P01562 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.74□□□□□ -0.05
IFNA1P01562 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.74□□□□□ -0.05
IFNA1P01562 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 AC131281.2-201ENST00000520478 145 ntBASIC14.74□□□□□ -0.05
IFNA1P01562 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.74□□□□□ -0.05
IFNA1P01562 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.74□□□□□ -0.05
IFNA1P01562 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.74□□□□□ -0.05
IFNA1P01562 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.74□□□□□ -0.05
IFNA1P01562 AC126755.1-201ENST00000525846 6405 ntBASIC14.74□□□□□ -0.05
IFNA1P01562 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
IFNA1P01562 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.74□□□□□ -0.05
IFNA1P01562 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
IFNA1P01562 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
IFNA1P01562 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
IFNA1P01562 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.74□□□□□ -0.05
IFNA1P01562 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
IFNA1P01562 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.74□□□□□ -0.05
IFNA1P01562 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
IFNA1P01562 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
IFNA1P01562 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
IFNA1P01562 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 MCRIP2P1-201ENST00000394346 511 ntBASIC14.73□□□□□ -0.05
IFNA1P01562 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.73□□□□□ -0.05
IFNA1P01562 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
IFNA1P01562 MYC-208ENST00000641036 567 ntBASIC14.73□□□□□ -0.05
IFNA1P01562 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IFNA1P01562 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
IFNA1P01562 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.73□□□□□ -0.05
IFNA1P01562 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms