Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.46□□□□□ -0.58
HERC2O95714 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.46□□□□□ -0.58
HERC2O95714 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
HERC2O95714 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.46□□□□□ -0.58
HERC2O95714 IGHV3-72-202ENST00000621503 303 ntBASIC11.46□□□□□ -0.58
HERC2O95714 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
HERC2O95714 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HERC2O95714 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
HERC2O95714 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HERC2O95714 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HERC2O95714 FAM8A2P-201ENST00000528813 1142 ntBASIC11.45□□□□□ -0.58
HERC2O95714 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HERC2O95714 KRT19P2-202ENST00000557173 1012 ntBASIC11.45□□□□□ -0.58
HERC2O95714 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
HERC2O95714 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
HERC2O95714 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
HERC2O95714 CREM-210ENST00000374721 2020 ntTSL 5 BASIC11.45□□□□□ -0.58
HERC2O95714 AC129492.6-201ENST00000611383 1305 ntBASIC11.45□□□□□ -0.58
HERC2O95714 HAUS4P1-201ENST00000406739 1145 ntBASIC11.45□□□□□ -0.58
HERC2O95714 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.45□□□□□ -0.58
HERC2O95714 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.45□□□□□ -0.58
HERC2O95714 AC067863.1-201ENST00000494933 530 ntBASIC11.45□□□□□ -0.58
HERC2O95714 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HERC2O95714 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.45□□□□□ -0.58
HERC2O95714 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.45□□□□□ -0.58
HERC2O95714 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HERC2O95714 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC11.45□□□□□ -0.58
HERC2O95714 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC11.45□□□□□ -0.58
HERC2O95714 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
HERC2O95714 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
HERC2O95714 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HERC2O95714 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HERC2O95714 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HERC2O95714 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.45□□□□□ -0.58
HERC2O95714 ABCD1P5-201ENST00000445663 754 ntBASIC11.45□□□□□ -0.58
HERC2O95714 AC136632.2-201ENST00000512891 861 ntBASIC11.45□□□□□ -0.58
HERC2O95714 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC11.45□□□□□ -0.58
HERC2O95714 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HERC2O95714 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.45□□□□□ -0.58
HERC2O95714 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.45□□□□□ -0.58
HERC2O95714 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC11.45□□□□□ -0.58
HERC2O95714 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HERC2O95714 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HERC2O95714 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 BCYRN1-201ENST00000418539 200 ntBASIC11.44□□□□□ -0.58
HERC2O95714 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.44□□□□□ -0.58
HERC2O95714 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 AC068587.9-201ENST00000641814 219 ntBASIC11.44□□□□□ -0.58
HERC2O95714 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
HERC2O95714 AL121761.2-201ENST00000598007 1648 ntBASIC11.44□□□□□ -0.58
HERC2O95714 AC092506.1-202ENST00000401022 528 ntBASIC11.44□□□□□ -0.58
HERC2O95714 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.44□□□□□ -0.58
HERC2O95714 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC11.44□□□□□ -0.58
HERC2O95714 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC11.44□□□□□ -0.58
HERC2O95714 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.44□□□□□ -0.58
HERC2O95714 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.44□□□□□ -0.58
HERC2O95714 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC11.44□□□□□ -0.58
HERC2O95714 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
HERC2O95714 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HERC2O95714 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HERC2O95714 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC11.44□□□□□ -0.58
HERC2O95714 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC11.44□□□□□ -0.58
HERC2O95714 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HERC2O95714 IGLL3P-201ENST00000412472 434 ntBASIC11.43□□□□□ -0.58
HERC2O95714 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.43□□□□□ -0.58
HERC2O95714 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.43□□□□□ -0.58
HERC2O95714 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC11.43□□□□□ -0.58
HERC2O95714 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HERC2O95714 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.43□□□□□ -0.58
HERC2O95714 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HERC2O95714 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
HERC2O95714 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.43□□□□□ -0.58
HERC2O95714 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC11.43□□□□□ -0.58
HERC2O95714 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.43□□□□□ -0.58
HERC2O95714 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.43□□□□□ -0.58
HERC2O95714 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HERC2O95714 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HERC2O95714 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HERC2O95714 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HERC2O95714 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
HERC2O95714 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
HERC2O95714 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.43□□□□□ -0.58
HERC2O95714 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC11.43□□□□□ -0.58
HERC2O95714 AL139099.5-201ENST00000635274 300 ntBASIC11.43□□□□□ -0.58
HERC2O95714 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HERC2O95714 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.43□□□□□ -0.58
HERC2O95714 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC11.43□□□□□ -0.58
HERC2O95714 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HERC2O95714 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms