Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL353692.3-201ENST00000407031 1396 ntBASIC8.29□□□□□ -1.08
USH2AO75445 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
USH2AO75445 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC8.29□□□□□ -1.08
USH2AO75445 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC8.29□□□□□ -1.08
USH2AO75445 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC8.29□□□□□ -1.08
USH2AO75445 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
USH2AO75445 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 AC109322.1-201ENST00000524499 1264 ntBASIC8.28□□□□□ -1.08
USH2AO75445 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 Z98882.1-201ENST00000622160 2253 ntBASIC8.28□□□□□ -1.08
USH2AO75445 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 SDHAP1-207ENST00000440850 2000 ntBASIC8.28□□□□□ -1.08
USH2AO75445 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC8.28□□□□□ -1.08
USH2AO75445 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
USH2AO75445 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC8.28□□□□□ -1.08
USH2AO75445 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
USH2AO75445 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC8.28□□□□□ -1.08
USH2AO75445 POLD4-211ENST00000539074 714 ntTSL 3 BASIC8.28□□□□□ -1.08
USH2AO75445 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 DUT-210ENST00000559935 569 ntTSL 3 BASIC8.28□□□□□ -1.08
USH2AO75445 AC073592.5-201ENST00000624854 528 ntBASIC8.28□□□□□ -1.08
USH2AO75445 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC8.28□□□□□ -1.08
USH2AO75445 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC8.28□□□□□ -1.08
USH2AO75445 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USH2AO75445 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC8.28□□□□□ -1.08
USH2AO75445 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC8.28□□□□□ -1.08
USH2AO75445 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC8.28□□□□□ -1.08
USH2AO75445 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC8.28□□□□□ -1.08
USH2AO75445 HOXB1-202ENST00000577092 1414 ntBASIC8.28□□□□□ -1.08
USH2AO75445 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC8.28□□□□□ -1.08
USH2AO75445 AP005212.1-201ENST00000581547 1997 ntBASIC8.28□□□□□ -1.08
USH2AO75445 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC8.28□□□□□ -1.08
USH2AO75445 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
USH2AO75445 GOLGA6L17P-202ENST00000614358 1398 ntBASIC8.27□□□□□ -1.08
USH2AO75445 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC8.27□□□□□ -1.08
USH2AO75445 HLA-DRB6-201ENST00000411500 1235 ntBASIC8.27□□□□□ -1.08
USH2AO75445 ARSEP1-201ENST00000420443 635 ntBASIC8.27□□□□□ -1.08
USH2AO75445 PARP8-218ENST00000513738 596 ntTSL 4 BASIC8.27□□□□□ -1.08
USH2AO75445 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC8.27□□□□□ -1.08
USH2AO75445 AC069262.1-201ENST00000539058 672 ntBASIC8.27□□□□□ -1.08
USH2AO75445 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC8.27□□□□□ -1.08
USH2AO75445 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC8.27□□□□□ -1.08
USH2AO75445 AC107918.4-202ENST00000641623 219 ntBASIC8.27□□□□□ -1.08
USH2AO75445 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
USH2AO75445 AC008556.1-201ENST00000610908 2040 ntBASIC8.27□□□□□ -1.08
USH2AO75445 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 AC254562.1-201ENST00000417586 456 ntBASIC8.27□□□□□ -1.09
USH2AO75445 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC8.27□□□□□ -1.09
USH2AO75445 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC8.27□□□□□ -1.09
USH2AO75445 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC8.27□□□□□ -1.09
USH2AO75445 PARP8-206ENST00000503665 572 ntTSL 4 BASIC8.27□□□□□ -1.09
USH2AO75445 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC8.27□□□□□ -1.09
USH2AO75445 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 ANKRD18DP-204ENST00000455355 1975 ntBASIC8.27□□□□□ -1.09
USH2AO75445 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC8.27□□□□□ -1.09
USH2AO75445 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
USH2AO75445 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
USH2AO75445 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC8.27□□□□□ -1.09
USH2AO75445 C20orf181-201ENST00000623918 480 ntBASIC8.27□□□□□ -1.09
USH2AO75445 AC112907.3-201ENST00000577781 2400 ntBASIC8.27□□□□□ -1.09
USH2AO75445 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC8.27□□□□□ -1.09
USH2AO75445 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms