Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PFDN1O60925 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PFDN1O60925 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PFDN1O60925 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PFDN1O60925 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.68■□□□□ 0.26
PFDN1O60925 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 AC009102.2-201ENST00000606772 1639 ntBASIC16.68■□□□□ 0.26
PFDN1O60925 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 KRT18P24-201ENST00000344739 1156 ntBASIC16.68■□□□□ 0.26
PFDN1O60925 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.68■□□□□ 0.26
PFDN1O60925 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.68■□□□□ 0.26
PFDN1O60925 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PFDN1O60925 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.68■□□□□ 0.26
PFDN1O60925 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.68■□□□□ 0.26
PFDN1O60925 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 AC132872.4-202ENST00000622924 2756 ntBASIC16.68■□□□□ 0.26
PFDN1O60925 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PFDN1O60925 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PFDN1O60925 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.67■□□□□ 0.26
PFDN1O60925 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.67■□□□□ 0.26
PFDN1O60925 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.67■□□□□ 0.26
PFDN1O60925 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PFDN1O60925 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.67■□□□□ 0.26
PFDN1O60925 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.67■□□□□ 0.26
PFDN1O60925 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.67■□□□□ 0.26
PFDN1O60925 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.67■□□□□ 0.26
PFDN1O60925 AL499627.2-201ENST00000606283 725 ntBASIC16.67■□□□□ 0.26
PFDN1O60925 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PFDN1O60925 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.67■□□□□ 0.26
PFDN1O60925 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PFDN1O60925 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PFDN1O60925 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.67■□□□□ 0.26
PFDN1O60925 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PFDN1O60925 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PFDN1O60925 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.66■□□□□ 0.26
PFDN1O60925 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.66■□□□□ 0.26
PFDN1O60925 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.66■□□□□ 0.26
PFDN1O60925 TCAF2P1-201ENST00000291129 2421 ntBASIC16.66■□□□□ 0.26
PFDN1O60925 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.66■□□□□ 0.26
PFDN1O60925 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.66■□□□□ 0.26
PFDN1O60925 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.66■□□□□ 0.26
PFDN1O60925 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PFDN1O60925 AC087239.1-201ENST00000622671 572 ntBASIC16.66■□□□□ 0.26
PFDN1O60925 AC068587.7-201ENST00000641602 218 ntBASIC16.66■□□□□ 0.26
PFDN1O60925 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.66■□□□□ 0.26
PFDN1O60925 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.66■□□□□ 0.26
PFDN1O60925 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.66■□□□□ 0.26
PFDN1O60925 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PFDN1O60925 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.66■□□□□ 0.26
PFDN1O60925 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PFDN1O60925 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.65■□□□□ 0.26
PFDN1O60925 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms