Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM13O60858 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM13O60858 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM13O60858 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
TRIM13O60858 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM13O60858 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM13O60858 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM13O60858 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM13O60858 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM13O60858 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM13O60858 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM13O60858 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM13O60858 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRIM13O60858 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM13O60858 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRIM13O60858 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM13O60858 KRT16P5-201ENST00000455284 522 ntBASIC18.35■□□□□ 0.53
TRIM13O60858 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM13O60858 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM13O60858 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM13O60858 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.35■□□□□ 0.53
TRIM13O60858 AC069544.1-201ENST00000609399 999 ntBASIC18.35■□□□□ 0.53
TRIM13O60858 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM13O60858 AL445675.2-201ENST00000620291 557 ntBASIC18.35■□□□□ 0.53
TRIM13O60858 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
TRIM13O60858 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM13O60858 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM13O60858 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM13O60858 ESPNP-201ENST00000270691 2015 ntBASIC18.35■□□□□ 0.53
TRIM13O60858 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM13O60858 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM13O60858 AC093677.2-201ENST00000600169 1863 ntBASIC18.35■□□□□ 0.53
TRIM13O60858 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TRIM13O60858 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM13O60858 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM13O60858 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM13O60858 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM13O60858 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRIM13O60858 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRIM13O60858 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TRIM13O60858 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM13O60858 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM13O60858 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM13O60858 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRIM13O60858 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 AC020916.1-201ENST00000587762 1774 ntBASIC18.34■□□□□ 0.53
TRIM13O60858 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM13O60858 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRIM13O60858 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRIM13O60858 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM13O60858 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM13O60858 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.33■□□□□ 0.53
TRIM13O60858 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM13O60858 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM13O60858 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM13O60858 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
TRIM13O60858 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM13O60858 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRIM13O60858 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM13O60858 AP003097.1-201ENST00000530657 1135 ntBASIC18.33■□□□□ 0.52
TRIM13O60858 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.33■□□□□ 0.52
TRIM13O60858 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRIM13O60858 AC104771.1-201ENST00000603335 964 ntBASIC18.33■□□□□ 0.52
TRIM13O60858 AC131212.4-201ENST00000623606 975 ntBASIC18.33■□□□□ 0.52
TRIM13O60858 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM13O60858 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM13O60858 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM13O60858 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM13O60858 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRIM13O60858 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM13O60858 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.33■□□□□ 0.52
TRIM13O60858 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM13O60858 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRIM13O60858 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM13O60858 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM13O60858 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM13O60858 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM13O60858 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM13O60858 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM13O60858 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM13O60858 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM13O60858 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM13O60858 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM13O60858 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms