Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TSPAN3O60637 PCED1CP-201ENST00000419887 785 ntBASIC19.18■□□□□ 0.66
TSPAN3O60637 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.18■□□□□ 0.66
TSPAN3O60637 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.18■□□□□ 0.66
TSPAN3O60637 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.18■□□□□ 0.66
TSPAN3O60637 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TSPAN3O60637 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.18■□□□□ 0.66
TSPAN3O60637 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TSPAN3O60637 AL121956.5-201ENST00000625261 221 ntBASIC19.18■□□□□ 0.66
TSPAN3O60637 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 MTMR9LP-203ENST00000426597 1545 ntBASIC19.18■□□□□ 0.66
TSPAN3O60637 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.18■□□□□ 0.66
TSPAN3O60637 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.18■□□□□ 0.66
TSPAN3O60637 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 AC034236.2-201ENST00000606662 1610 ntBASIC19.18■□□□□ 0.66
TSPAN3O60637 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN3O60637 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TSPAN3O60637 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.17■□□□□ 0.66
TSPAN3O60637 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.17■□□□□ 0.66
TSPAN3O60637 ZNF444P1-201ENST00000559497 298 ntBASIC19.17■□□□□ 0.66
TSPAN3O60637 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.17■□□□□ 0.66
TSPAN3O60637 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TSPAN3O60637 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN3O60637 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.17■□□□□ 0.66
TSPAN3O60637 Z98044.1-201ENST00000632503 1764 ntBASIC19.16■□□□□ 0.66
TSPAN3O60637 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.16■□□□□ 0.66
TSPAN3O60637 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.16■□□□□ 0.66
TSPAN3O60637 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.16■□□□□ 0.66
TSPAN3O60637 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.16■□□□□ 0.66
TSPAN3O60637 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.16■□□□□ 0.66
TSPAN3O60637 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.16■□□□□ 0.66
TSPAN3O60637 VENTXP5-201ENST00000523979 775 ntBASIC19.16■□□□□ 0.66
TSPAN3O60637 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.16■□□□□ 0.66
TSPAN3O60637 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 MIR3917-201ENST00000580971 93 ntBASIC19.16■□□□□ 0.66
TSPAN3O60637 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.16■□□□□ 0.66
TSPAN3O60637 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TSPAN3O60637 AC005332.1-201ENST00000577698 1310 ntBASIC19.16■□□□□ 0.66
TSPAN3O60637 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN3O60637 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.16■□□□□ 0.66
TSPAN3O60637 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TSPAN3O60637 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN3O60637 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TSPAN3O60637 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TSPAN3O60637 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 UPK3BP1-201ENST00000428678 509 ntBASIC19.15■□□□□ 0.66
TSPAN3O60637 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.15■□□□□ 0.66
TSPAN3O60637 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.15■□□□□ 0.66
TSPAN3O60637 AC104390.1-201ENST00000555663 520 ntBASIC19.15■□□□□ 0.66
TSPAN3O60637 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN3O60637 AC010240.3-201ENST00000607688 395 ntBASIC19.15■□□□□ 0.66
TSPAN3O60637 AC091076.1-201ENST00000610741 619 ntBASIC19.15■□□□□ 0.66
TSPAN3O60637 AC079602.3-201ENST00000623931 403 ntBASIC19.15■□□□□ 0.66
TSPAN3O60637 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TSPAN3O60637 AC083906.6-201ENST00000641366 219 ntBASIC19.15■□□□□ 0.66
TSPAN3O60637 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TSPAN3O60637 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms